DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17385 and znf1003

DIOPT Version :9

Sequence 1:NP_001286418.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_001104681.1 Gene:znf1003 / 793476 ZFINID:ZDB-GENE-080219-42 Length:336 Species:Danio rerio


Alignment Length:258 Identity:80/258 - (31%)
Similarity:127/258 - (49%) Gaps:28/258 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HNHNKTTYECKLCAKSFCNSGNLDR-HMKVHNDVRPFVCNICSKAFAQAVNLQRHYAVHSGERPF 102
            :|||      .:..|...:..::|: |..||.:|:|..|.:|.|::.|..:||:|..:|:||||:
Zfish    58 NNHN------LMVTKEESDELSVDKVHHSVHTEVKPNSCTLCGKSYKQLSHLQQHQKIHTGERPY 116

  Fly   103 TCNFCNKSFTQQSNMKRHKMTHTGEKPFRCQRCGRYFSQLVNLKKHKLGHLNAKPYQCNYCEKGF 167
            ||:.|.|.|.:.|.:.:|...||||:|..|.:|||.|.:...|::|...|.|.|||.|:.|.|.|
Zfish   117 TCDQCGKRFRRSSTLNQHMKIHTGERPHYCDQCGRTFLRTSELRRHLTVHTNEKPYSCSECGKSF 181

  Fly   168 TQLSNFKRHLQSH--IKEGVDVDVPAS-IQAAAALARERLESEQKPSFFECMVCRAIFDTFADYE 229
            ::|||.|.|.:.|  :||.|.::...| |.|......:|:.:.:||  ::|..|...|......:
Zfish   182 SRLSNLKVHQKIHAGVKEHVCIECGKSFINAQVLQIHQRIHTGEKP--YKCSHCDKRFSLLHSLK 244

  Fly   230 KHE-----------AKCHEDHER-AQLEVNQMSH----MHPDDYLPMKFAVPDLDTHEIIIET 276
            .||           .:|.:..:. :||..:.|.|    .|..|.....|..|....:.:.:.|
Zfish   245 SHERIHTGEKPYTCTQCGKSFKNSSQLRQHMMIHTRVKTHKCDQCGKTFLRPSHLKNHLTVHT 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17385NP_001286418.1 COG5048 <13..181 CDD:227381 56/144 (39%)
C2H2 Zn finger 18..39 CDD:275368 80/258 (31%)
C2H2 Zn finger 48..68 CDD:275368 3/20 (15%)
C2H2 Zn finger 76..96 CDD:275368 7/19 (37%)
C2H2 Zn finger 104..124 CDD:275368 6/19 (32%)
C2H2 Zn finger 132..148 CDD:275368 6/15 (40%)
C2H2 Zn finger 160..180 CDD:275368 9/19 (47%)
znf1003NP_001104681.1 COG5048 <36..269 CDD:227381 71/218 (33%)
C2H2 Zn finger 90..110 CDD:275368 7/19 (37%)
zf-H2C2_2 102..127 CDD:290200 13/24 (54%)
C2H2 Zn finger 118..138 CDD:275368 6/19 (32%)
zf-H2C2_2 131..155 CDD:290200 11/23 (48%)
C2H2 Zn finger 146..166 CDD:275368 7/19 (37%)
zf-H2C2_2 158..183 CDD:290200 11/24 (46%)
C2H2 Zn finger 174..194 CDD:275368 9/19 (47%)
C2H2 Zn finger 202..222 CDD:275368 4/19 (21%)
zf-H2C2_2 215..238 CDD:290200 5/24 (21%)
C2H2 Zn finger 230..250 CDD:275368 5/19 (26%)
zf-H2C2_2 242..267 CDD:290200 3/24 (13%)
C2H2 Zn finger 258..278 CDD:275368 4/19 (21%)
C2H2 Zn finger 286..306 CDD:275368 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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