DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17385 and Zif

DIOPT Version :10

Sequence 1:NP_610962.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster


Alignment Length:186 Identity:49/186 - (26%)
Similarity:100/186 - (53%) Gaps:9/186 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVEFDETVANQFSCKRCDR-TFRSKRDQTLHRQEVHN------HNKTTYECKLCAKSFCNSGNLD 62
            |.:::||.:.|.:.:...: :.:::|.:.  |:.:::      ..|..|.|.:|...:...|.:.
  Fly   177 EKQYEETPSQQLALQEAAKASLKARRGRV--RRGLNSLTTSDGTEKGGYICDVCGNFYEKRGRMM 239

  Fly    63 RHMKVHNDVRPFVCNICSKAFAQAVNLQRHYAVHSGERPFTCNFCNKSFTQQSNMKRHKMTHTGE 127
            .|.:.|:.:..:.|.:|...|.....|::|...|:|.:|:.|:||::.|..:|.:|.|:..|.|.
  Fly   240 EHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENVHRGI 304

  Fly   128 KPFRCQRCGRYFSQLVNLKKHKLGHLNAKPYQCNYCEKGFTQLSNFKRHLQSHIKE 183
            ||:.|:.|.:.|:...:|.||:|.|.:.|.|:|:||.|.|..|.:.::|.::.:.:
  Fly   305 KPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEETKLHQ 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17385NP_610962.1 COG5048 <13..181 CDD:227381 46/174 (26%)
C2H2 Zn finger 18..39 CDD:275368 2/21 (10%)
C2H2 Zn finger 48..68 CDD:275368 4/19 (21%)
C2H2 Zn finger 76..96 CDD:275368 5/19 (26%)
C2H2 Zn finger 104..124 CDD:275368 7/19 (37%)
C2H2 Zn finger 132..148 CDD:275368 4/15 (27%)
C2H2 Zn finger 160..180 CDD:275368 7/19 (37%)
ZifNP_649657.1 zf-AD 9..87 CDD:462262
C2H2 Zn finger 225..245 CDD:275368 4/19 (21%)
COG5048 <250..369 CDD:227381 36/111 (32%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..353 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.

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