DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17385 and D19B

DIOPT Version :9

Sequence 1:NP_001286418.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster


Alignment Length:271 Identity:71/271 - (26%)
Similarity:109/271 - (40%) Gaps:59/271 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DETVANQFSCKRCDRTFRSKRDQTLHRQEVHNHNKTTYECKLCAKSFCNSGNLDRHMKVHNDVRP 73
            |::..|.....:..|...::||:  ||         ..:|.:|.:.|..:...:.|||.|||:.|
  Fly   227 DDSDGNPKDKPKRKRIPATERDR--HR---------LIDCHICHQKFKKAIRYEEHMKHHNDLLP 280

  Fly    74 FVCNI----------------------------------CSKAFAQAV----NLQRHYAVHSGER 100
            |.|.:                                  |:|:||:.|    :::|.:.|.:.:|
  Fly   281 FQCTVESCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQR 345

  Fly   101 PFTCNFCNKSFTQQSNMKRHKMTHTGEK-PFRCQRCGRYFSQLVNLKKHKLGHLNAKPYQCNYCE 164
            .|.|..|.|.|...:.:|:|...||||: ||.|:.||:.|.....|:.|.|.|...|.:.|.||.
  Fly   346 DFPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHLLRHAGIKNHVCPYCG 410

  Fly   165 KGFTQLSNFKRHLQSHIKEGVDVDVPASIQAA---AALARERLESEQKPSFFECMVCRAIFDTFA 226
            .|.|....:.:|:.:|.|| ...:......|:   .|||.......:|...|.|..|...|.   
  Fly   411 VGKTTRQEWNKHILTHTKE-KKYECRQCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFG--- 471

  Fly   227 DYEKHEAKCHE 237
              :.|..|.||
  Fly   472 --KSHACKIHE 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17385NP_001286418.1 COG5048 <13..181 CDD:227381 54/206 (26%)
C2H2 Zn finger 18..39 CDD:275368 5/20 (25%)
C2H2 Zn finger 48..68 CDD:275368 6/19 (32%)
C2H2 Zn finger 76..96 CDD:275368 7/57 (12%)
C2H2 Zn finger 104..124 CDD:275368 6/19 (32%)
C2H2 Zn finger 132..148 CDD:275368 5/15 (33%)
C2H2 Zn finger 160..180 CDD:275368 6/19 (32%)
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 6/19 (32%)
C2H2 Zn finger 283..335 CDD:275368 6/51 (12%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
COG5048 <347..512 CDD:227381 44/140 (31%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 434..455 CDD:275368 4/20 (20%)
C2H2 Zn finger 463..483 CDD:275368 7/23 (30%)
C2H2 Zn finger 491..511 CDD:275368
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:290200
C2H2 Zn finger 643..663 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449749
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.