DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17385 and crol

DIOPT Version :9

Sequence 1:NP_001286418.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:216 Identity:67/216 - (31%)
Similarity:103/216 - (47%) Gaps:29/216 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FSCKRCDRTFRSKRDQTLHRQEVHNHNKTTYECKLCAKSFCNSGNLDRHMKVHNDVRPFVCNICS 80
            |.|:.|.:.|.:.:|.|.| .::| .....:.|.:|...|.|:.:|:||||.|:..:||.|.||.
  Fly   249 FMCQVCGQGFTTSQDLTRH-GKIH-IGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQ 311

  Fly    81 KAFAQAVNLQRHYAVHSGERPFTCNFCNKSFTQQSNMKRHKMTHTGEKPFRCQRCGRYFSQLVNL 145
            |.||:..:|..|:..|:||.||.|.:|.|:||::.:|..|...||||.|.||..|.:.|::..:.
  Fly   312 KTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHY 376

  Fly   146 KKHKLGHLNAKPYQCNYCEKGFTQLSNFKRHLQSHIKEGVDVDVPASIQAAAALARERLESEQKP 210
            ..|.:.|....|:||:.|.|.:|:..:...|::||..|     .|                    
  Fly   377 VNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNE-----TP-------------------- 416

  Fly   211 SFFECMVCRAIFDTFADYEKH 231
              |.|.:|...|.....:..|
  Fly   417 --FRCEICGKSFSRKEHFTNH 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17385NP_001286418.1 COG5048 <13..181 CDD:227381 59/164 (36%)
C2H2 Zn finger 18..39 CDD:275368 6/20 (30%)
C2H2 Zn finger 48..68 CDD:275368 9/19 (47%)
C2H2 Zn finger 76..96 CDD:275368 8/19 (42%)
C2H2 Zn finger 104..124 CDD:275368 7/19 (37%)
C2H2 Zn finger 132..148 CDD:275368 3/15 (20%)
C2H2 Zn finger 160..180 CDD:275368 5/19 (26%)
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 6/20 (30%)
C2H2 Zn finger 279..299 CDD:275368 9/19 (47%)
COG5048 300..723 CDD:227381 49/163 (30%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 4/19 (21%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
C2H2 Zn finger 419..439 CDD:275368 4/17 (24%)
C2H2 Zn finger 447..467 CDD:275368
C2H2 Zn finger 475..495 CDD:275368
C2H2 Zn finger 503..523 CDD:275368
C2H2 Zn finger 531..551 CDD:275368
C2H2 Zn finger 559..579 CDD:275368
C2H2 Zn finger 587..607 CDD:275368
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446660
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.