DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17385 and CG12299

DIOPT Version :10

Sequence 1:NP_610962.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster


Alignment Length:319 Identity:87/319 - (27%)
Similarity:133/319 - (41%) Gaps:70/319 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TVANQFSCKRCDRTFRSKRDQTLHRQEVHNHNKTTYECKLCAKSFCNSGNLDRHMKVHNDVRPFV 75
            :|.....|.:||:.|.:.....|| |:.|.....|:.|..|.:.|.....||.||::|.....:.
  Fly   333 SVRKPHQCVQCDKGFINYSSLLLH-QKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQ 396

  Fly    76 CNICSKAFAQAVNLQRHYAVHSGERPFTCNFCNKSFTQQSNMKRHKMTHTGEKPFRCQRCGRYFS 140
            |.||.:||..:..|.:|...|.||:||||:.|::||||..::..|...|||||||:|:.|.:.|:
  Fly   397 CAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFT 461

  Fly   141 QLVNLKKHKLGHLNAKPYQCNYCEKGFTQLSNFKRHLQSHIKEGVDVDVPASIQAAAALARERLE 205
            |..:|..|...|...|||.|..|.|.::|.:...:|:|:|         ..:..|:|:.:...|.
  Fly   462 QASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAH---------QMASAASASTSPGLLV 517

  Fly   206 SEQKPSFFECMVC------------------RAIFDTFADYEKHEA--------KCHEDH----- 239
            ::|......|:||                  .|:.||......:.|        ||..:.     
  Fly   518 AKQPHETLVCIVCGSLHADATALASHVHSQHAALLDTMKQSGMNTAPGGAIPDVKCSAEEQQAYV 582

  Fly   240 ERAQLEVNQMSH----------------MHPDD-------------YLPMKFAVPDLDT 269
            ||.|..:.||:|                .||..             .||.:..:|.:|:
  Fly   583 ERVQCVLQQMNHQQQHQQHQQQPPQQQQQHPQQQQQQHLQQQPHQMQLPQQPKLPAMDS 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17385NP_610962.1 COG5048 <13..181 CDD:227381 60/167 (36%)
C2H2 Zn finger 18..39 CDD:275368 7/20 (35%)
C2H2 Zn finger 48..68 CDD:275368 7/19 (37%)
C2H2 Zn finger 76..96 CDD:275368 7/19 (37%)
C2H2 Zn finger 104..124 CDD:275368 7/19 (37%)
C2H2 Zn finger 132..148 CDD:275368 5/15 (33%)
C2H2 Zn finger 160..180 CDD:275368 6/19 (32%)
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 61/168 (36%)
C2H2 Zn finger 256..276 CDD:275368
C2H2 Zn finger 284..304 CDD:275368
zf-H2C2_2 296..321 CDD:463886
C2H2 Zn finger 312..332 CDD:275368
C2H2 Zn finger 340..360 CDD:275368 7/20 (35%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
zf-H2C2_2 409..434 CDD:463886 12/24 (50%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:463886 11/24 (46%)
C2H2 Zn finger 453..473 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.