DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17385 and CG18262

DIOPT Version :10

Sequence 1:NP_610962.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster


Alignment Length:249 Identity:66/249 - (26%)
Similarity:103/249 - (41%) Gaps:59/249 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DETVANQFSCKR-------------CDRTFRSKRDQTLHRQEVHNHNKTTYECKLCAKSFCNSGN 60
            |::.:.:.|.||             |::|||::||...||.:     .|...|.:|.|.|..|||
  Fly   204 DKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWK-----HTGIFCDICGKPFTQSGN 263

  Fly    61 LDRHMKVHNDVRPF----------------------------VCNICSKAFAQAVNLQRHYAVHS 97
            :.||.:.|:.::|.                            :|.:|.:.......|..|...|:
  Fly   264 MMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMRRHT 328

  Fly    98 GERPFTCNFCNKSFTQQSNMKRHKMTHTGEKPFRCQRCGRYFSQLVNLKKHKLGHLNAKPYQCNY 162
            ||||..|..|.|:|....::..|.::||..:||.|..||..|.:...|:.|||.|...:.|.|..
  Fly   329 GERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKL 393

  Fly   163 CEKGFTQLSNFKRHLQSHIKEGVDVDVPASIQAAA-----ALARERLESEQKPS 211
            |.|.|.|......|::||        .||.::.|.     ::..|.:|.:..|:
  Fly   394 CGKTFAQSGGLNAHMRSH--------DPARVKGAVKPLPQSVTIEVIEGKSPPT 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17385NP_610962.1 COG5048 <13..181 CDD:227381 58/208 (28%)
C2H2 Zn finger 18..39 CDD:275368 10/33 (30%)
C2H2 Zn finger 48..68 CDD:275368 9/19 (47%)
C2H2 Zn finger 76..96 CDD:275368 4/19 (21%)
C2H2 Zn finger 104..124 CDD:275368 5/19 (26%)
C2H2 Zn finger 132..148 CDD:275368 5/15 (33%)
C2H2 Zn finger 160..180 CDD:275368 6/19 (32%)
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 22/95 (23%)
C2H2 Zn finger 224..246 CDD:275368 8/26 (31%)
C2H2 Zn finger 251..271 CDD:275368 9/19 (47%)
zf-H2C2_2 263..288 CDD:463886 5/24 (21%)
C2H2 Zn finger 279..327 CDD:275368 4/47 (9%)
zf-H2C2_2 320..342 CDD:463886 10/21 (48%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
zf-C2H2 389..411 CDD:395048 7/21 (33%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)

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