DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10104 and AT1G66180

DIOPT Version :10

Sequence 1:NP_610961.1 Gene:CG10104 / 36602 FlyBaseID:FBgn0033933 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_564867.1 Gene:AT1G66180 / 842933 AraportID:AT1G66180 Length:430 Species:Arabidopsis thaliana


Alignment Length:511 Identity:98/511 - (19%)
Similarity:169/511 - (33%) Gaps:210/511 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PVLFILPVQFQHPVSCKLQLYRVPLRRFP----SARHRF-EKLGIRMD----------RLRLKYA 58
            |:.|...:.:. .:|..|.|: :||...|    :..||| ..|..|.:          |.|.||:
plant     7 PLFFFFFLNYV-SLSTSLSLH-LPLTSLPISTTTNSHRFTTSLLSRKNPSPSSPPYNFRSRFKYS 69

  Fly    59 EEVSHFRGEWNSAVKSTPLSNYLDAQYFGPITIGTPPQTFKVIFDTGSSNLWV------------ 111
                      .:.:.|.|              ||||||..:::.||||...|:            
plant    70 ----------MALIISLP--------------IGTPPQAQQMVLDTGSQLSWIQCHRKKLPPKPK 110

  Fly   112 ----PSATCASTMVAC-------RVHNRYFAKRSTSHQVRGDHFAIHYGSGSLSGFLSTDTVRVA 165
                ||.:.:.:.:.|       |:.:  |...::....|..|::..|..|:.:          .
plant   111 TSFDPSLSSSFSTLPCSHPLCKPRIPD--FTLPTSCDSNRLCHYSYFYADGTFA----------E 163

  Fly   166 GLEIRDQTFAEATEMPGPIFLAAKFD-----GIFGLAYRSISMQRIKPPFYAMMEQGLLTKPIFS 225
            |..::::.....||:..|:.|....:     ||.|:....:|          .:.|..::|  ||
plant   164 GNLVKEKITFSNTEITPPLILGCATESSDDRGILGMNRGRLS----------FVSQAKISK--FS 216

  Fly   226 VYLSRNGEKDG----GAIFFGGSNPHYYTGNFTYVQV-----SHR-------AYW---------- 264
            ..:.....:.|    |: |:.|.||:.:  .|.||.:     |.|       ||.          
plant   217 YCIPPKSNRPGFTPTGS-FYLGDNPNSH--GFKYVSLLTFPESQRMPNLDPLAYTVPMIGIRFGL 278

  Fly   265 -QVKMDSAVIRNLELCQQGCEVIIDTGTSFLAL---PYDQAILINESI--------------GGT 311
             ::.:..:|.|. :....| :.::|:|:.|..|   .||:   :...|              |||
plant   279 KKLNISGSVFRP-DAGGSG-QTMVDSGSEFTHLVDAAYDK---VRAEIMTRVGRRLKKGYVYGGT 338

  Fly   312 ------------PSSFG----------QFLVPCDSVPDLPKITFTLG--------GRRFFLESHE 346
                        |...|          :.|||.:      ::...:|        ||...|.:..
plant   339 ADMCFDGNVAMIPRLIGDLVFVFTRGVEILVPKE------RVLVNVGGGIHCVGIGRSSMLGAAS 397

  Fly   347 YVFRDIYQDRRICSSAFIAVDLPSPSGPLWILGDVFLGKYYTEFDMERHRIGFADA 402
            .:..:::|..                  ||:           |||:...|:|||.|
plant   398 NIIGNVHQQN------------------LWV-----------EFDVTNRRVGFAKA 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10104NP_610961.1 pepsin_retropepsin_like 76..400 CDD:472175 77/425 (18%)
AT1G66180NP_564867.1 pepsin_A_like_plant 73..426 CDD:133143 81/433 (19%)
PTZ00165 <78..>124 CDD:240300 13/45 (29%)

Return to query results.
Submit another query.