DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10104 and pgc-like.1

DIOPT Version :9

Sequence 1:NP_610961.1 Gene:CG10104 / 36602 FlyBaseID:FBgn0033933 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001025603.1 Gene:pgc-like.1 / 594991 XenbaseID:XB-GENE-964422 Length:385 Species:Xenopus tropicalis


Alignment Length:380 Identity:142/380 - (37%)
Similarity:213/380 - (56%) Gaps:17/380 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LYRVPLRRFPSARHRFEKLGIRMDRLRLKYAEEVSHFRGEWNS--AVKSTPLSNYLDAQYFGPIT 90
            |.||||.:..:.|...::.|:..:.::....|....::....:  |:...|:  |:||.|:|.|:
 Frog    17 LIRVPLHKSKTIRETMKEKGVLKEFMKTHKREPAMKYKYNLKNDFAIAYEPM--YMDAAYYGQIS 79

  Fly    91 IGTPPQTFKVIFDTGSSNLWVPSATCASTMVACRVHNRYFAKRSTSHQVRGDHFAIHYGSGSLSG 155
            :|||||.|.|:||||||||||.|..|.|.  ||:.|..:...:|:::..:...|:|.||||||:|
 Frog    80 VGTPPQNFMVLFDTGSSNLWVASTYCQSG--ACQNHPLFNPSQSSTYTSKNQQFSITYGSGSLTG 142

  Fly   156 FLSTDTVRVAGLEIRDQTFAEATEMPGPIFLAAKFDGIFGLAYRSISMQRIKPPFYAMMEQGLLT 220
            ....|||.|.||.|.:|....:...||..|:.:.|:||||:||.:::......|...|::|.|||
 Frog   143 VFGYDTVTVQGLSITNQEIGLSINEPGTNFVYSSFEGIFGMAYPALAAGGATTPMQGMLQQNLLT 207

  Fly   221 KPIFSVYLSRNGEKDGGAIFFGGSNPHYYTGNFTYVQVSHRAYWQVKMDSAVIRNLEL--CQQGC 283
            .||||||:|    ...|.:.|||.:...|:|...:..|:...|||:.:|...|.....  |.|||
 Frog   208 YPIFSVYMS----SQSGEVIFGGVDSSLYSGQIYWAPVTQELYWQIAIDEFSINGQATGWCSQGC 268

  Fly   284 EVIIDTGTSFLALPYDQAILINESIGGTPSSFGQFLVPCDSVPDLPKITFTLGGRRFFLESHEYV 348
            :.::|||||.|.:|........:|:|...:.:|:::|.|::|..||.|:||:.|.:|.:....| 
 Frog   269 QAMVDTGTSLLTVPQQFMGTFLQSLGAQQNQYGEYIVNCNNVQSLPPISFTINGVQFPIPPSAY- 332

  Fly   349 FRDIYQDRRICSSAFIAVDLPSPSG-PLWILGDVFLGKYYTEFDMERHRIGFADA 402
               |.|:...||.......|||.:| |.||||||||.:||:.:||..:|:|||.:
 Frog   333 ---ILQNNGYCSVGVEVTYLPSQNGQPFWILGDVFLRQYYSVYDMGNNRVGFAQS 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10104NP_610961.1 A1_Propeptide 28..54 CDD:285240 7/25 (28%)
pepsin_retropepsin_like 76..400 CDD:299705 131/326 (40%)
Asp 84..402 CDD:278455 129/320 (40%)
pgc-like.1NP_001025603.1 A1_Propeptide 17..45 CDD:369623 7/27 (26%)
pepsin_retropepsin_like 71..382 CDD:386101 129/320 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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