DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10104 and pgc

DIOPT Version :10

Sequence 1:NP_610961.1 Gene:CG10104 / 36602 FlyBaseID:FBgn0033933 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001015682.1 Gene:pgc / 548353 XenbaseID:XB-GENE-5838607 Length:385 Species:Xenopus tropicalis


Alignment Length:381 Identity:150/381 - (39%)
Similarity:211/381 - (55%) Gaps:23/381 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LYRVPLRRFPSARHRFEKLGIRMDRLRLKYAEEVSHFRGEWNS----AVKSTPLSNYLDAQYFGP 88
            |.||||:||.|.|...::.|:..|.|:....|....:  .|||    .|...|:  |||..|||.
 Frog    17 LVRVPLKRFKSTRETMKENGVLNDFLKTHKREPAIKY--NWNSQSNFGVAYEPM--YLDIYYFGE 77

  Fly    89 ITIGTPPQTFKVIFDTGSSNLWVPSATCASTMVACRVHNRYFAKRSTSHQVRGDHFAIHYGSGSL 153
            |:||||||.|.|.||||||||||.|..|.|.  ||..|..:....|:::......|::.|||||:
 Frog    78 ISIGTPPQNFLVAFDTGSSNLWVASTYCQSQ--ACTNHPLFNPSLSSTYTSNNQQFSMWYGSGSM 140

  Fly   154 SGFLSTDTVRVAGLEIRDQTFAEATEMPGPIFLAAKFDGIFGLAYRSISMQRIKPPFYAMMEQGL 218
            :|.|..|||.|.||.|::|....:...|...|..:|||||||:||:|:|..........:::|.|
 Frog   141 TGVLGYDTVTVQGLSIQNQELGLSVTEPSSFFYYSKFDGIFGMAYQSLSAGGASTAVQGLIQQNL 205

  Fly   219 LTKPIFSVYL-SRNGEKDGGAIFFGGSNPHYYTGNFTYVQVSHRAYWQVKMDSAVIRNLEL--CQ 280
            :.:|:||.|| |::||     :.|||.:...::|...:..|:...|||:.:|...:.....  |.
 Frog   206 IPQPVFSFYLTSQSGE-----VIFGGVDNSLFSGQIYWTPVTQEIYWQIAIDEFSVNGQATGWCS 265

  Fly   281 QGCEVIIDTGTSFLALPYDQAILINESIGGTPSSFGQFLVPCDSVPDLPKITFTLGGRRFFLESH 345
            |||:.|:||||..|.:|......:.:.:|...:..|||||.|:||.:||.|:||:.|.:|.:...
 Frog   266 QGCQGIVDTGTPLLTIPQQYLSTLVQYVGAQEAQNGQFLVNCNSVQNLPPISFTISGIQFSIPPS 330

  Fly   346 EYVFRDIYQDRRICSSAFIAVDLPSPSG-PLWILGDVFLGKYYTEFDMERHRIGFA 400
            .|    |.|....|...|.:..|||.:| ||||||||||.:||:.:|...:::|||
 Frog   331 AY----ILQMNGYCVVGFESTYLPSRNGQPLWILGDVFLRQYYSVYDFGNNQVGFA 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10104NP_610961.1 pepsin_retropepsin_like 76..400 CDD:472175 131/327 (40%)
pgcNP_001015682.1 A1_Propeptide 19..45 CDD:462326 11/25 (44%)
pepsin_retropepsin_like 71..383 CDD:472175 130/323 (40%)

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