DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10104 and pgc

DIOPT Version :9

Sequence 1:NP_610961.1 Gene:CG10104 / 36602 FlyBaseID:FBgn0033933 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001015682.1 Gene:pgc / 548353 XenbaseID:XB-GENE-5838607 Length:385 Species:Xenopus tropicalis


Alignment Length:381 Identity:150/381 - (39%)
Similarity:211/381 - (55%) Gaps:23/381 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LYRVPLRRFPSARHRFEKLGIRMDRLRLKYAEEVSHFRGEWNS----AVKSTPLSNYLDAQYFGP 88
            |.||||:||.|.|...::.|:..|.|:....|....:  .|||    .|...|:  |||..|||.
 Frog    17 LVRVPLKRFKSTRETMKENGVLNDFLKTHKREPAIKY--NWNSQSNFGVAYEPM--YLDIYYFGE 77

  Fly    89 ITIGTPPQTFKVIFDTGSSNLWVPSATCASTMVACRVHNRYFAKRSTSHQVRGDHFAIHYGSGSL 153
            |:||||||.|.|.||||||||||.|..|.|.  ||..|..:....|:::......|::.|||||:
 Frog    78 ISIGTPPQNFLVAFDTGSSNLWVASTYCQSQ--ACTNHPLFNPSLSSTYTSNNQQFSMWYGSGSM 140

  Fly   154 SGFLSTDTVRVAGLEIRDQTFAEATEMPGPIFLAAKFDGIFGLAYRSISMQRIKPPFYAMMEQGL 218
            :|.|..|||.|.||.|::|....:...|...|..:|||||||:||:|:|..........:::|.|
 Frog   141 TGVLGYDTVTVQGLSIQNQELGLSVTEPSSFFYYSKFDGIFGMAYQSLSAGGASTAVQGLIQQNL 205

  Fly   219 LTKPIFSVYL-SRNGEKDGGAIFFGGSNPHYYTGNFTYVQVSHRAYWQVKMDSAVIRNLEL--CQ 280
            :.:|:||.|| |::||     :.|||.:...::|...:..|:...|||:.:|...:.....  |.
 Frog   206 IPQPVFSFYLTSQSGE-----VIFGGVDNSLFSGQIYWTPVTQEIYWQIAIDEFSVNGQATGWCS 265

  Fly   281 QGCEVIIDTGTSFLALPYDQAILINESIGGTPSSFGQFLVPCDSVPDLPKITFTLGGRRFFLESH 345
            |||:.|:||||..|.:|......:.:.:|...:..|||||.|:||.:||.|:||:.|.:|.:...
 Frog   266 QGCQGIVDTGTPLLTIPQQYLSTLVQYVGAQEAQNGQFLVNCNSVQNLPPISFTISGIQFSIPPS 330

  Fly   346 EYVFRDIYQDRRICSSAFIAVDLPSPSG-PLWILGDVFLGKYYTEFDMERHRIGFA 400
            .|    |.|....|...|.:..|||.:| ||||||||||.:||:.:|...:::|||
 Frog   331 AY----ILQMNGYCVVGFESTYLPSRNGQPLWILGDVFLRQYYSVYDFGNNQVGFA 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10104NP_610961.1 A1_Propeptide 28..54 CDD:285240 11/25 (44%)
pepsin_retropepsin_like 76..400 CDD:299705 131/327 (40%)
Asp 84..402 CDD:278455 129/321 (40%)
pgcNP_001015682.1 A1_Propeptide 17..45 CDD:369623 12/27 (44%)
pepsin_retropepsin_like 71..383 CDD:386101 130/323 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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