DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10104 and Pgcl

DIOPT Version :10

Sequence 1:NP_610961.1 Gene:CG10104 / 36602 FlyBaseID:FBgn0033933 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster


Alignment Length:383 Identity:143/383 - (37%)
Similarity:209/383 - (54%) Gaps:33/383 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LYRVPLRRFPSARHRFEKLGIRMDRLRLKYAEEVSHFRGEWNSAVKSTPLSNYLDAQYFGPITIG 92
            |.|:|:::.|:.:...:.:....|.::.||..:.:      .:......||||.:.||:|.|:||
  Fly    26 LRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYT------ANGYPMEHLSNYDNFQYYGNISIG 84

  Fly    93 TPPQTFKVIFDTGSSNLWVPSATCASTMVACRVHNRYFAKRSTSHQVRGDHFAIHYGSGSLSGFL 157
            ||.|.|.|.|||||||||||.::|.||  ||:.|..::..:|:::...|..|:|.||:||:||:|
  Fly    85 TPGQDFLVQFDTGSSNLWVPGSSCIST--ACQDHQVFYKNKSSTYVANGTAFSITYGTGSVSGYL 147

  Fly   158 STDTVRVAGLEIRDQTFAEATEMPGPIFLAAKFDGIFGLAYRSISMQRIKPPFYAMMEQGLLTKP 222
            |.|.|..|||.|:.|||.|.|...|..|:.|.||||.|:.:.|:::..:.|.|..||:|||:..|
  Fly   148 SVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPTFQNMMQQGLVQSP 212

  Fly   223 IFSVYLSRNGEKD--GGAIFFGGSNPHYYTGNFTYVQVSHRAYWQVKMDSAVIRNLELCQQGCEV 285
            :||.:|..||...  ||.:..|||:|..|:|:.|||.|...|||:.:.|...:.:..: ....:.
  Fly   213 VFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKFQTDYIKVGSTSI-STFAQA 276

  Fly   286 IIDTGTSFLALP---YDQ-AILINESIGGTPSSFGQFLVPCDSVPDLPKITFTLGGRRFFLESHE 346
            |.|||||.:..|   ||| :.|.|.:..|        |..|.|. ..|.:...:.|..|.:.:..
  Fly   277 IADTGTSLIIAPQAQYDQISQLFNANSEG--------LFECSST-SYPDLIININGVDFKIPAKY 332

  Fly   347 YVFRDIYQDRRICSSAFIAVDLPSPSGPLWILGDVFLGKYYTEFDMERHRIGFADARS 404
            |    |.::...||.|     :.|.:...||:||||||:.|||||:...|:|||...|
  Fly   333 Y----IIEEEDFCSLA-----IQSINQDFWIMGDVFLGRIYTEFDVGNQRLGFAPVNS 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10104NP_610961.1 pepsin_retropepsin_like 76..400 CDD:472175 133/329 (40%)
PgclNP_525030.1 Asp 76..379 CDD:394983 131/323 (41%)

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