DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10104 and Pgc

DIOPT Version :10

Sequence 1:NP_610961.1 Gene:CG10104 / 36602 FlyBaseID:FBgn0033933 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_579818.1 Gene:Pgc / 24864 RGDID:3943 Length:392 Species:Rattus norvegicus


Alignment Length:405 Identity:159/405 - (39%)
Similarity:227/405 - (56%) Gaps:24/405 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLLVSLLPVLFILPVQFQHPVSCKLQLYRVPLRRFPSARHRFEKLGIRMDRLRL-KY-AEEVSHF 64
            |::|:||    .||:       .:..|.|||||:..|.|...::.|:..|.|:. || ..:..||
  Rat     3 WMVVALL----CLPL-------LEASLLRVPLRKMKSIRETMKEQGVLKDFLKTHKYDPGQKYHF 56

  Fly    65 RGEWNSAVKSTPLSNYLDAQYFGPITIGTPPQTFKVIFDTGSSNLWVPSATCASTMVACRVHNRY 129
            ....:.:|...|:: |:||.|||.|:||||||.|.|:||||||||||.|..|.|.  ||..|.|:
  Rat    57 GNFGDYSVLYEPMA-YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQSE--ACTTHARF 118

  Fly   130 FAKRSTSHQVRGDHFAIHYGSGSLSGFLSTDTVRVAGLEIRDQTFAEATEMPGPIFLAAKFDGIF 194
            ...:|:::...|..|::.||:|||:||...||:.|..:::.:|.|..:...||..|:.|:||||.
  Rat   119 NPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIM 183

  Fly   195 GLAYRSISMQRIKPPFYAMMEQGLLTKPIFSVYLSRNGEKDGGAIFFGGSNPHYYTGNFTYVQVS 259
            ||||..:|..........|:.:|.|::|:|.|||......:||.|.|||.:.:.|||..|:|.|:
  Rat   184 GLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLGSQQGSNGGQIVFGGVDKNLYTGEITWVPVT 248

  Fly   260 HRAYWQVKMDSAVIRNLE---LCQQGCEVIIDTGTSFLALPYDQAILINESIGGTPSSFGQFLVP 321
            ...|||:.:|..:|.:..   ...|||:.|:|||||.|.:|......:.::||.....:|::.|.
  Rat   249 QELYWQITIDDFLIGDQASGWCSSQGCQGIVDTGTSLLVMPAQYLSELLQTIGAQEGEYGEYFVS 313

  Fly   322 CDSVPDLPKITFTLGGRRFFLESHEYVFRDIYQDRRICSSAFIAVDLPSPSG-PLWILGDVFLGK 385
            ||||..||.::|.|.|.:|.|....|    |.|:...|.....::.|.|.|| ||||||||||..
  Rat   314 CDSVSSLPTLSFVLNGVQFPLSPSSY----IIQEDNFCMVGLESISLTSESGQPLWILGDVFLRS 374

  Fly   386 YYTEFDMERHRIGFA 400
            ||..|||..:::|.|
  Rat   375 YYAIFDMGNNKVGLA 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10104NP_610961.1 pepsin_retropepsin_like 76..400 CDD:472175 136/327 (42%)
PgcNP_579818.1 A1_Propeptide 20..46 CDD:462326 10/25 (40%)
pepsin_retropepsin_like 73..391 CDD:472175 135/323 (42%)

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