DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10104 and pgc.3

DIOPT Version :10

Sequence 1:NP_610961.1 Gene:CG10104 / 36602 FlyBaseID:FBgn0033933 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_002933028.1 Gene:pgc.3 / 100489782 XenbaseID:XB-GENE-29079883 Length:383 Species:Xenopus tropicalis


Alignment Length:381 Identity:145/381 - (38%)
Similarity:209/381 - (54%) Gaps:25/381 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LYRVPLRRFPSARHRFEKLGIRMDRLRLKYAEEVSHFRGEWNSAVKSTPLSNYLDAQYFGPITIG 92
            |.||||.:..|.|....:.|:....|:....:..|.:||   .||.:.  |.|.|..|:|||:||
 Frog    17 LVRVPLMKSKSIRQNMAEAGVLDKYLQTHKIDLSSRYRG---YAVVTE--SMYFDTYYYGPISIG 76

  Fly    93 TPPQTFKVIFDTGSSNLWVPSATCASTMVACRVHNRYFAKRSTSHQVRGDHFAIHYGSG----SL 153
            ||||.|.|:||||||||||||:.|.|:  ||..||.:...:|:::...|..|.:.||.|    |:
 Frog    77 TPPQNFLVLFDTGSSNLWVPSSYCQSS--ACTNHNVFKPSQSSTYSSNGQKFTMGYGGGNVASSV 139

  Fly   154 SGFLSTDTVRVAGLEIRDQTFAEATEMPGPIFLAAKFDGIFGLAYRSISMQRIKPPFYAMMEQGL 218
            :|....|||.:.|:.|.:|.|......|...|..:.||||.||||..:|::..:.....||::.|
 Frog   140 TGLFGYDTVSIQGISITNQEFGLTITEPTSNFYYSPFDGILGLAYPGLSVEGAQTVLQGMMQENL 204

  Fly   219 LTKPIFSVYL-SRNGEKDGGAIFFGGSNPHYYTGNFTYVQVSHRAYWQVKMDSAVIRNLEL--CQ 280
            |...:||:|| |::||     |.|||.:.:.|||...:..:|...||||.:....|.....  |.
 Frog   205 LNPSMFSIYLGSQSGE-----IIFGGVDSNLYTGQIYWAPLSQELYWQVALQEFSINGQATGWCS 264

  Fly   281 QGCEVIIDTGTSFLALPYDQAILINESIGGTPSSFGQFLVPCDSVPDLPKITFTLGGRRFFLESH 345
            |||:.|:||||:.|.:|......:...: |..:..|.:.|.|:::.:||.::||:.|..|.|...
 Frog   265 QGCQAIVDTGTTQLNIPQTYLTKLLPYL-GIQTQNGGYYVNCNNLQNLPTLSFTINGVSFPLPPS 328

  Fly   346 EYVFRDIYQDRRICSSAFIAVDLPSPSG-PLWILGDVFLGKYYTEFDMERHRIGFA 400
            .|    |.|:...|.:.|:.:.||:.:| ||||||||||.:||:.||...::||||
 Frog   329 AY----IIQENGYCYANFLNLSLPAQNGQPLWILGDVFLRQYYSVFDYGNNQIGFA 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10104NP_610961.1 pepsin_retropepsin_like 76..400 CDD:472175 129/331 (39%)
pgc.3XP_002933028.1 A1_Propeptide 19..45 CDD:462326 8/25 (32%)
pepsin_retropepsin_like 66..381 CDD:472175 129/327 (39%)

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