DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and vipr2

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_571854.1 Gene:vipr2 / 81886 ZFINID:ZDB-GENE-010406-4 Length:439 Species:Danio rerio


Alignment Length:463 Identity:136/463 - (29%)
Similarity:222/463 - (47%) Gaps:60/463 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 HIDSVNASGSDPLLD-LHNLDGIGESVELQC---LVQE---HIEASTYGNDSGHCLTQFDSILCW 63
            |..|||  |..|... |:.|    :..|.:|   |..|   |.|.         |...:|:..||
Zfish    14 HAHSVN--GRHPNCQFLYEL----QMAEKECLGDLADEPLLHTEG---------CRGMWDNFSCW 63

  Fly    64 PRTARGTLAVLQCMDELQGIHYDSSKNATRFCHANGTWEKYTNYDACAHLPAPESVPEFEVIVEL 128
            .....|.:.|..|...|:.: :......:|.|...|....|.:.|:....|...:...:.....:
Zfish    64 HHADVGKVVVNNCPAALKNL-FTRDGIISRNCTTEGWSNVYPSIDSVCFAPTNTNTTMYVFYTVM 127

  Fly   129 PTIIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMSALFWILLLSVQISIRSG- 192
            .| :|.:|::|||::|.....:...|::|.|.||.||.||||::|:.|:..::..::..|..:| 
Zfish   128 KT-LYTLGHSLSLIALITGSTILCLFRKLHCTRNYIHLNLFFSFILRAIAVLVKDAILFSHENGE 191

  Fly   193 -------VGSCIALITLFHFFTLTNFFWMLVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGPALF 250
                   :|..::|:.| ::|.:.||:|:|||||||:.|::..|| :|..|.||..||||.|.:|
Zfish   192 CTVQPSLMGCKVSLVIL-NYFIMANFYWLLVEGLYLHTLLMVIFS-ENRHFIIYLLIGWGFPTVF 254

  Fly   251 VVTWAVAKSLTVTYSTPEKYEINCPWMQETHVDWIYQGPVCAVLIINLTFLLRIMWVLITKLRSA 315
            |:.|.|.:.........|:.:...||..   ::|    |:.|.:|:|....:.|:.:|:.|||..
Zfish   255 VIPWIVCRIYLEDTGCWERIDNPIPWRV---INW----PIMASVILNFILFISIIRILVQKLRCP 312

  Fly   316 NT--VETRQYRKAAKALLVLIPLFGITYLV---VLAGPSESGLMGHMFAVLRAVLLSTQGFSVSL 375
            :.  .:..|||:.||:.|:||||||:.|:|   ::.|..|.......|.:   .|.|.||..|::
Zfish   313 DVGGNDQSQYRRLAKSTLLLIPLFGVHYIVFVYIIDGNGERENYKIFFDL---GLGSFQGLVVAI 374

  Fly   376 FYCFLNSEVRNALRHHISTWRDTRTIQ-LNQNRRYTTKSFSKGGGSPRAESMRPLTSYYGRGKRE 439
            .||||||||::.|:.   .||..|..: :.::.|..:.|.|:.|....|:..|       ..:.:
Zfish   375 LYCFLNSEVQSELKR---KWRSLRLKRYIGRDYRLHSSSISRNGTENMAQFQR-------NTRAQ 429

  Fly   440 SCVSSATT 447
            |.:.:.||
Zfish   430 SFLQTETT 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 13/59 (22%)
7tmB1_DH_R 126..394 CDD:320391 96/280 (34%)
TM helix 1 129..153 CDD:320391 7/23 (30%)
TM helix 2 162..183 CDD:320391 9/20 (45%)
TM helix 3 197..219 CDD:320391 9/21 (43%)
TM helix 4 238..254 CDD:320391 9/15 (60%)
TM helix 5 279..302 CDD:320391 5/22 (23%)
TM helix 6 327..349 CDD:320391 12/24 (50%)
TM helix 7 356..381 CDD:320391 9/24 (38%)
vipr2NP_571854.1 HRM 50..110 CDD:280888 14/69 (20%)
7tm_2 124..372 CDD:278432 86/260 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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