DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and ghrhrb

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_021333028.1 Gene:ghrhrb / 792410 ZFINID:ZDB-GENE-110127-2 Length:529 Species:Danio rerio


Alignment Length:448 Identity:132/448 - (29%)
Similarity:199/448 - (44%) Gaps:90/448 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CLTQFDSILCWPRTARGTLAVLQCMDELQ-----GIHYDSSKNATRFCHANGTWEKYTNYD-ACA 111
            |.|::|...||.....|.:..:.|.:..|     |..:       |.|..:|..|.|.:|: ||.
Zfish   142 CPTEWDEFWCWSGAEVGQVVNISCSEVSQLFVNHGFIF-------RNCTKDGWTEVYPSYENACE 199

  Fly   112 HLPAPESVPEFEVIVELPTIIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIM-- 174
            .:...||..|......... :|..||..||:||..|:.||..|::..|.||.||.|||.::|:  
Zfish   200 IVEDVESETETTYYATFRQ-VYTAGYATSLISLITAIFVFTVFRKFHCTRNYIHINLFASFILRA 263

  Fly   175 SALFWILLLSVQISIRSGV--------------GSCIALITLFHFFTLTNFFWMLVEGLYLYMLV 225
            ||:|          |:..|              .||.|.:..|.|..|.|:||:||||:||..|:
Zfish   264 SAIF----------IKDAVLFADENLDHCFMSTTSCKAAVAFFQFSILANYFWLLVEGMYLQTLL 318

  Fly   226 VKTFSGDNLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEKYEINCPWMQETHVD---WIYQ 287
            ..||......|..|..||||.|.|.:..|.:|::.         ::.|..| .:|.|.   ||.:
Zfish   319 ALTFVSQKKYFWWYILIGWGLPTLILTIWVLARNF---------FDNNGCW-DDTDVAYFWWIIK 373

  Fly   288 GPVCAVLIINLTFLLRIMWVLITKLRSANT--VETRQYRKAAKALLVLIPLFGITYLVVLAGPSE 350
            ||:...|:||....:.::.:|:.||:|...  .:|..:.:.||:.|.||||||:.|:|....|..
Zfish   374 GPITVSLLINFLIFINVIRILVQKLKSPGMGGGDTNHFMRLAKSTLFLIPLFGMHYMVFAFLPEN 438

  Fly   351 SGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQLNQNRRYTTKSFS 415
            :|.....|  |...|...|||.|:|.|||||.||:..|:..:..|:              |:|:.
Zfish   439 TGENARHF--LELGLGPFQGFVVALLYCFLNGEVQAELKKRLWKWQ--------------TQSYL 487

  Fly   416 KGGGSPRAESMRPLTSYYGRGKRESCVSSATTT--TLVGQHAPLSLH-RGSNNALHTM 470
            :                |.:.:|.....|:|.|  :::.:.:|..|. ..|||::.|:
Zfish   488 R----------------YSKRRRTLFTESSTVTQISVLEKSSPKELPLTESNNSVSTV 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 17/64 (27%)
7tmB1_DH_R 126..394 CDD:320391 98/288 (34%)
TM helix 1 129..153 CDD:320391 10/23 (43%)
TM helix 2 162..183 CDD:320391 10/22 (45%)
TM helix 3 197..219 CDD:320391 10/21 (48%)
TM helix 4 238..254 CDD:320391 7/15 (47%)
TM helix 5 279..302 CDD:320391 9/25 (36%)
TM helix 6 327..349 CDD:320391 11/21 (52%)
TM helix 7 356..381 CDD:320391 11/24 (46%)
ghrhrbXP_021333028.1 HRM 141..199 CDD:308439 16/63 (25%)
7tmB1_GHRHR2 213..480 CDD:320399 98/289 (34%)
TM helix 1 215..240 CDD:320399 10/25 (40%)
TM helix 2 249..271 CDD:320399 11/31 (35%)
TM helix 3 290..317 CDD:320399 13/26 (50%)
TM helix 4 329..349 CDD:320399 9/19 (47%)
TM helix 5 364..394 CDD:320399 8/29 (28%)
TM helix 6 410..437 CDD:320399 11/26 (42%)
TM helix 7 442..467 CDD:320399 11/26 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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