DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and Crhr2

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_006236618.1 Gene:Crhr2 / 64680 RGDID:70547 Length:431 Species:Rattus norvegicus


Alignment Length:397 Identity:153/397 - (38%)
Similarity:225/397 - (56%) Gaps:21/397 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLDLHNLDGIGESVE---LQCLVQEHIEASTYGNDSG---HCLTQFDSI-LCWPRTARGTLAVLQ 75
            ||.|..:...|::::   |..|::::...:|..|.||   :|.|..|.| .|||::|.|.|....
  Rat    19 LLPLLQVAQPGQALQDQPLWTLLEQYCHRTTTRNFSGPYSYCNTTLDQIGTCWPQSAPGALVERP 83

  Fly    76 CMDELQGIHYDSSKNATRFCHANGTWEKYTNYDACAHLPAPESVPEFEVIVELPTIIYYIGYTLS 140
            |.:...||.|::::||.|.|..||||....||..|..: ..:...::::...:..||.|:|:.:|
  Rat    84 CPEYFNGIKYNTTRNAYRECLENGTWASRVNYSHCEPI-LDDKQRKYDLHYRIALIINYLGHCVS 147

  Fly   141 LVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMSALFWILLLSVQISIRSGVGS-CIALITLFH 204
            :|:|..|.::|...:.:|||||.||.||..|:|:..:.|.||..:...:..|... |..:.|:|:
  Rat   148 VVALVAAFLLFLVLRSIRCLRNVIHWNLITTFILRNITWFLLQLIDHEVHEGNEVWCRCVTTIFN 212

  Fly   205 FFTLTNFFWMLVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEK 269
            :|.:||||||.|||.||:..:|.|:|.::||..::..|||..|...:|.|||.|..         
  Rat   213 YFVVTNFFWMFVEGCYLHTAIVMTYSTEHLRKWLFLFIGWCIPCPIIVAWAVGKLY--------- 268

  Fly   270 YEINCPWMQETH---VDWIYQGPVCAVLIINLTFLLRIMWVLITKLRSANTVETRQYRKAAKALL 331
            ||....|..:..   ||:|||||:..||:||..||..|:.:|:||||::.|.||.|||||.||.|
  Rat   269 YENEQCWFGKEPGDLVDYIYQGPIILVLLINFVFLFNIVRILMTKLRASTTSETIQYRKAVKATL 333

  Fly   332 VLIPLFGITYLVVLAGPSESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWR 396
            ||:||.||||::....|.|..|...:|....:.|.|.|||.||:||||.|.|||:|||.....|:
  Rat   334 VLLPLLGITYMLFFVNPGEDDLSQIVFIYFNSFLQSFQGFFVSVFYCFFNGEVRSALRKRWHRWQ 398

  Fly   397 DTRTIQL 403
            |...:::
  Rat   399 DHHALRV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 25/60 (42%)
7tmB1_DH_R 126..394 CDD:320391 116/271 (43%)
TM helix 1 129..153 CDD:320391 9/23 (39%)
TM helix 2 162..183 CDD:320391 9/20 (45%)
TM helix 3 197..219 CDD:320391 11/21 (52%)
TM helix 4 238..254 CDD:320391 5/15 (33%)
TM helix 5 279..302 CDD:320391 12/25 (48%)
TM helix 6 327..349 CDD:320391 11/21 (52%)
TM helix 7 356..381 CDD:320391 12/24 (50%)
Crhr2XP_006236618.1 HormR 56..127 CDD:214468 25/71 (35%)
7tm_2 133..375 CDD:278432 103/250 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 191 1.000 Domainoid score I3138
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55612
Inparanoid 1 1.050 268 1.000 Inparanoid score I2947
OMA 1 1.010 - - QHG46870
OrthoDB 1 1.010 - - D1163977at2759
OrthoFinder 1 1.000 - - FOG0002345
OrthoInspector 1 1.000 - - mtm9081
orthoMCL 1 0.900 - - OOG6_103932
Panther 1 1.100 - - LDO PTHR45620
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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