DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and Glp2r

DIOPT Version :10

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_068620.1 Gene:Glp2r / 60432 RGDID:620270 Length:550 Species:Rattus norvegicus


Alignment Length:539 Identity:154/539 - (28%)
Similarity:238/539 - (44%) Gaps:124/539 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLDLHN-LDGIGESVELQCLVQEHIEASTYGNDSGHCLTQFDSILCWPRTARGTLAVLQCMDELQ 81
            |.|||| |.||                        .|...||..:|||.:..|.::| .|...|.
  Rat    84 LEDLHNRLSGI------------------------FCNGTFDRYVCWPHSYPGNVSV-PCPSYLP 123

  Fly    82 GIHYDSSKNATRFCHANGTWEKYTN-------YDACAHLPA-PESVPEFEVIVELPTIIYYIGYT 138
            ..:.:|...|.|.|.|.|||:...|       ...|:...: .::|..:.::..| .::|.:||:
  Rat   124 WWNAESPGRAYRHCLAQGTWQTRENTTDIWQDESECSENHSFRQNVDHYALLYTL-QLMYTVGYS 187

  Fly   139 LSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMSALF---------------------WILL 182
            :||:||.|||.:|.:.::|.|.||.||.|||.::|:..|.                     |:..
  Rat   188 VSLISLFLALTLFLFLRKLHCTRNYIHMNLFASFILKVLAVLVKDMVSHNSYSKRPDDESGWMSY 252

  Fly   183 LSVQISIRSGVGSCIALITLFHFFTLTNFFWMLVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGP 247
            || :.|:     ||.::..|.|:|..||..|:|||||||:.|:..|...:...:..|..:||..|
  Rat   253 LS-ETSV-----SCRSVQVLLHYFVGTNHLWLLVEGLYLHTLLEPTVFPERRLWPKYLVVGWAFP 311

  Fly   248 ALFVVTWAVAKS---LTVTYSTPEKYEINCPWMQETHVDWIYQGPVCAVLIINLTFLLRIMWVLI 309
            .|||:.|..|::   .|..::|....:|   |       ||.:||:...:.:|....|:|:.:||
  Rat   312 MLFVIPWGFARAHLENTRCWATNGNLKI---W-------WIIRGPMLLCVTVNFFIFLKILKLLI 366

  Fly   310 TKLRSANTVETRQYR-KAAKALLVLIPLFGITYLVVLAGPSE--SGLMGHMFAVLRAVLLSTQGF 371
            :||: |:.:..|.|: :.||:.|:||||.|:..::....|.:  .|....:...::..|.|..||
  Rat   367 SKLK-AHQMCFRDYKYRLAKSTLLLIPLLGVHEVLFTFFPDDQVQGFSKRIRLFIQLTLSSVHGF 430

  Fly   372 SVSLFYCFLNSEVRNALRHHISTWR--------DTRTIQLNQNRRY---TTKSFSKGGGSPRAES 425
            .|:|.|.|.|.||:..||   .:|.        ..||..|.:|.|:   .:|..|:|.||...:.
  Rat   431 LVALQYGFANGEVKAELR---KSWGRFLLARHWGCRTCVLGKNFRFLGKCSKKLSEGDGSETLQK 492

  Fly   426 MRPLTSYYGRGKRESCVSSATTTTL--VGQHAPLSLHRGSNNALHTMPTLAANAMSSGSTLSVMP 488
            :|..|          |.|...:.||  ||    :..|||            ..|...||:||...
  Rat   493 LRFST----------CSSHLASETLGDVG----VQPHRG------------RGAWPRGSSLSESS 531

  Fly   489 R---AISPLMRQGLEENSV 504
            .   .::..|.:.|||:.:
  Rat   532 EGDFTLANTMEEILEESEI 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 20/66 (30%)
7tmB1_DH_R 126..394 CDD:320391 94/294 (32%)
TM helix 1 128..153 CDD:320391 12/24 (50%)
TM helix 2 162..184 CDD:320391 9/42 (21%)
TM helix 3 197..224 CDD:320391 13/26 (50%)
TM helix 4 236..256 CDD:320391 8/19 (42%)
TM helix 5 279..308 CDD:320391 7/28 (25%)
TM helix 6 322..349 CDD:320391 9/27 (33%)
TM helix 7 356..381 CDD:320391 8/24 (33%)
Glp2rNP_068620.1 HRM 93..162 CDD:397086 22/93 (24%)
7tmB1_GLP2R 175..453 CDD:320394 95/298 (32%)
TM helix 1 177..202 CDD:320394 12/25 (48%)
TM helix 2 211..233 CDD:320394 8/21 (38%)
TM helix 3 261..288 CDD:320394 13/26 (50%)
TM helix 4 300..320 CDD:320394 8/19 (42%)
TM helix 5 336..365 CDD:320394 9/38 (24%)
TM helix 6 379..406 CDD:320394 9/26 (35%)
TM helix 7 415..440 CDD:320394 8/24 (33%)

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