DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and Glp2r

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_068620.1 Gene:Glp2r / 60432 RGDID:620270 Length:550 Species:Rattus norvegicus


Alignment Length:539 Identity:154/539 - (28%)
Similarity:238/539 - (44%) Gaps:124/539 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLDLHN-LDGIGESVELQCLVQEHIEASTYGNDSGHCLTQFDSILCWPRTARGTLAVLQCMDELQ 81
            |.|||| |.||                        .|...||..:|||.:..|.::| .|...|.
  Rat    84 LEDLHNRLSGI------------------------FCNGTFDRYVCWPHSYPGNVSV-PCPSYLP 123

  Fly    82 GIHYDSSKNATRFCHANGTWEKYTN-------YDACAHLPA-PESVPEFEVIVELPTIIYYIGYT 138
            ..:.:|...|.|.|.|.|||:...|       ...|:...: .::|..:.::..| .::|.:||:
  Rat   124 WWNAESPGRAYRHCLAQGTWQTRENTTDIWQDESECSENHSFRQNVDHYALLYTL-QLMYTVGYS 187

  Fly   139 LSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMSALF---------------------WILL 182
            :||:||.|||.:|.:.::|.|.||.||.|||.::|:..|.                     |:..
  Rat   188 VSLISLFLALTLFLFLRKLHCTRNYIHMNLFASFILKVLAVLVKDMVSHNSYSKRPDDESGWMSY 252

  Fly   183 LSVQISIRSGVGSCIALITLFHFFTLTNFFWMLVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGP 247
            || :.|:     ||.::..|.|:|..||..|:|||||||:.|:..|...:...:..|..:||..|
  Rat   253 LS-ETSV-----SCRSVQVLLHYFVGTNHLWLLVEGLYLHTLLEPTVFPERRLWPKYLVVGWAFP 311

  Fly   248 ALFVVTWAVAKS---LTVTYSTPEKYEINCPWMQETHVDWIYQGPVCAVLIINLTFLLRIMWVLI 309
            .|||:.|..|::   .|..::|....:|   |       ||.:||:...:.:|....|:|:.:||
  Rat   312 MLFVIPWGFARAHLENTRCWATNGNLKI---W-------WIIRGPMLLCVTVNFFIFLKILKLLI 366

  Fly   310 TKLRSANTVETRQYR-KAAKALLVLIPLFGITYLVVLAGPSE--SGLMGHMFAVLRAVLLSTQGF 371
            :||: |:.:..|.|: :.||:.|:||||.|:..::....|.:  .|....:...::..|.|..||
  Rat   367 SKLK-AHQMCFRDYKYRLAKSTLLLIPLLGVHEVLFTFFPDDQVQGFSKRIRLFIQLTLSSVHGF 430

  Fly   372 SVSLFYCFLNSEVRNALRHHISTWR--------DTRTIQLNQNRRY---TTKSFSKGGGSPRAES 425
            .|:|.|.|.|.||:..||   .:|.        ..||..|.:|.|:   .:|..|:|.||...:.
  Rat   431 LVALQYGFANGEVKAELR---KSWGRFLLARHWGCRTCVLGKNFRFLGKCSKKLSEGDGSETLQK 492

  Fly   426 MRPLTSYYGRGKRESCVSSATTTTL--VGQHAPLSLHRGSNNALHTMPTLAANAMSSGSTLSVMP 488
            :|..|          |.|...:.||  ||    :..|||            ..|...||:||...
  Rat   493 LRFST----------CSSHLASETLGDVG----VQPHRG------------RGAWPRGSSLSESS 531

  Fly   489 R---AISPLMRQGLEENSV 504
            .   .::..|.:.|||:.:
  Rat   532 EGDFTLANTMEEILEESEI 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 20/66 (30%)
7tmB1_DH_R 126..394 CDD:320391 94/294 (32%)
TM helix 1 129..153 CDD:320391 11/23 (48%)
TM helix 2 162..183 CDD:320391 9/41 (22%)
TM helix 3 197..219 CDD:320391 9/21 (43%)
TM helix 4 238..254 CDD:320391 7/15 (47%)
TM helix 5 279..302 CDD:320391 5/22 (23%)
TM helix 6 327..349 CDD:320391 8/21 (38%)
TM helix 7 356..381 CDD:320391 8/24 (33%)
Glp2rNP_068620.1 HRM 93..162 CDD:280888 22/93 (24%)
7tm_2 175..432 CDD:278432 85/274 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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