DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh44-R1 and Pth1r

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_038937952.1 Gene:Pth1r / 56813 RGDID:3442 Length:600 Species:Rattus norvegicus


Alignment Length:447 Identity:141/447 - (31%)
Similarity:212/447 - (47%) Gaps:78/447 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSKNATRFCHANGTWE-------KYTNYDAC 110
            ||.::|:|:|||..|.|.:..:.|.|.:...::..  :|.|.|..||:||       .:.||..|
  Rat   117 CLPEWDNIVCWPLGAPGEVVAVPCPDYIYDFNHKG--HAYRRCDRNGSWEVVPGHNRTWANYSEC 179

  Fly   111 AHLPAPESVPEFEVIVELPTIIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMS 175
            ......|: .|.||...| .:||.:||::||.||::|:::.|||:.|.|.||.||.::|.::::.
  Rat   180 LKFMTNET-REREVFDRL-GMIYTVGYSMSLASLTVAVLILAYFRRLHCTRNYIHMHMFLSFMLR 242

  Fly   176 AL------------FWI----------LLLSVQI-----SIRSGVGSCIALITLFHFFTLTNFFW 213
            |.            |.:          |.:..|:     :...|...|...:|.|.:|..||::|
  Rat   243 AASIFVKDAVLYSGFTLDEAERLTEEELHIIAQVPPPPAAAAVGYAGCRVAVTFFLYFLATNYYW 307

  Fly   214 MLVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGPALFVVTW-AVAKSLTVTYSTPEKYEINCPWM 277
            :|||||||:.|:...|..:......:...|||.||:||..| .|..:|..|         .|..:
  Rat   308 ILVEGLYLHSLIFMAFFSEKKYLWGFTIFGWGLPAVFVAVWVGVRATLANT---------GCWDL 363

  Fly   278 QETHVDWIYQGPVCAVLIINLTFLLRIMWVLITKLRSANT--VETR-QYRKAAKALLVLIPLFGI 339
            ...|..||.|.|:.|.:::|....:.|:.||.||||..|.  .:|| ||||..::.|||:||||:
  Rat   364 SSGHKKWIIQVPILASVVLNFILFINIIRVLATKLRETNAGRCDTRQQYRKLLRSTLVLVPLFGV 428

  Fly   340 TYLVVLAGP--SESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQ 402
            .|.|.:|.|  ..||.:..:......:..|.|||.|::.|||.|.||:..:|...|.|  |..:.
  Rat   429 HYTVFMALPYTEVSGTLWQIQMHYEMLFNSFQGFFVAIIYCFCNGEVQAEIRKSWSRW--TLALD 491

  Fly   403 LNQNRRYTTKSFSKGGGSPRAESMRPLTSYYGRGKRESCVSSATTTTLVGQHAPLSL 459
            ..:..|..:.|:|.|          |:.|:             |:.|.||..|.|||
  Rat   492 FKRKARSGSSSYSYG----------PMVSH-------------TSVTNVGPRAGLSL 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 21/65 (32%)
7tmB1_DH_R 126..394 CDD:320391 99/300 (33%)
TM helix 1 129..153 CDD:320391 9/23 (39%)
TM helix 2 162..183 CDD:320391 7/42 (17%)
TM helix 3 197..219 CDD:320391 9/21 (43%)
TM helix 4 238..254 CDD:320391 7/15 (47%)
TM helix 5 279..302 CDD:320391 7/22 (32%)
TM helix 6 327..349 CDD:320391 11/23 (48%)
TM helix 7 356..381 CDD:320391 8/24 (33%)
Pth1rXP_038937952.1 HRM 114..179 CDD:397086 20/63 (32%)
7tm_GPCRs 193..485 CDD:421689 99/301 (33%)
TM helix 1 195..220 CDD:410628 10/25 (40%)
TM helix 2 229..251 CDD:410628 5/21 (24%)
TM helix 3 291..318 CDD:410628 13/26 (50%)
TM helix 4 330..350 CDD:410628 8/19 (42%)
TM helix 5 365..394 CDD:410628 8/28 (29%)
TM helix 6 411..438 CDD:410628 14/26 (54%)
TM helix 7 447..472 CDD:410628 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.