DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and Calcrl

DIOPT Version :10

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_061252.2 Gene:Calcrl / 54598 MGIID:1926944 Length:463 Species:Mus musculus


Alignment Length:439 Identity:131/439 - (29%)
Similarity:215/439 - (48%) Gaps:70/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLDLHNLDGIGE-----------SVELQC---LVQEHIEASTYGNDSGHCLTQFDSILCWPRTAR 68
            |:...:.:|:.:           :.:.:|   ::|:.|:.:    :..:|...:|..|||...|.
Mouse    19 LISAESEEGVNQTDLGVTRNKIMTAQYECYQKIMQDPIQQA----EGLYCNRTWDGWLCWNDVAA 79

  Fly    69 GTLAVLQCMDELQGIHYDSSKNATRFCHANGTW-------EKYTNYDAC---AHLPAPESVPEFE 123
            ||.::..|.|..|  .:|.|:..|:.|..:|.|       ..:|||..|   .|.....::..|.
Mouse    80 GTESMQYCPDYFQ--DFDPSEKVTKICDQDGHWFRHPDSNRTWTNYTLCNNSTHEKVKTALNLFY 142

  Fly   124 VIVELPTIIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMSALFWILLLSV--- 185
            :.:        ||:.||:.||.::||:|.|||.|.|.|.|:|.||||::|.:::..|:.|:.   
Mouse   143 LTI--------IGHGLSIASLIISLIIFFYFKSLSCQRITLHKNLFFSFICNSIVTIIHLTAVAN 199

  Fly   186 -QISIRSGVGSCIALITLFHFFTL-TNFFWMLVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGPA 248
             |..:.:...|| .:....|.:.: .|:||||.||:||:.|:|.....:......|..:|||.|.
Mouse   200 NQALVATNPVSC-KVSQFIHLYLMGCNYFWMLCEGVYLHTLIVVAVFAEKQHLMWYYFLGWGFPL 263

  Fly   249 LFVVTWAVAKSLTVTYSTPEKYEINCPWMQETHVDWIYQGPVCAVLIINLTFLLRIMWVLITKLR 313
            |.....|:|:||        .|..||....:||:.:|..||:||.|::||.|||.|:.||||||:
Mouse   264 LPACIHAIARSL--------YYNDNCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLK 320

  Fly   314 SANTVETRQYRKAAKALLVLIPLFGITYLVVLAGPSESGLMGHMFAVLRAVLLSTQGFSVSLFYC 378
            ..:.||:..|.||.:|.|:|:||.||.:::....| |..:...::..:..:|:..||..|:..:|
Mouse   321 VTHQVESNLYMKAVRATLILVPLLGIEFVLFPWRP-EGKVAEEVYDYVMHILMHFQGLLVATIFC 384

  Fly   379 FLNSEVRNALRHHISTWRDTRTIQLNQNRRYTTKSFSKGGGSPRAESMR 427
            |.|.||:..||.:   |...: ||.             |.|...::::|
Mouse   385 FFNGEVQAILRRN---WNQYK-IQF-------------GNGFSHSDALR 416

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 21/69 (30%)
7tmB1_DH_R 126..394 CDD:320391 97/272 (36%)
TM helix 1 128..153 CDD:320391 9/24 (38%)
TM helix 2 162..184 CDD:320391 8/21 (38%)
TM helix 3 197..224 CDD:320391 10/27 (37%)
TM helix 4 236..256 CDD:320391 6/19 (32%)
TM helix 5 279..308 CDD:320391 14/28 (50%)
TM helix 6 322..349 CDD:320391 10/26 (38%)
TM helix 7 356..381 CDD:320391 6/24 (25%)
CalcrlNP_061252.2 HRM 61..128 CDD:397086 21/68 (31%)
7tmB1_calcitonin_R 137..410 CDD:341343 103/307 (34%)
TM helix 1 139..164 CDD:341343 10/32 (31%)
TM helix 2 173..195 CDD:341343 8/21 (38%)
TM helix 3 212..239 CDD:341343 10/26 (38%)
TM helix 4 251..271 CDD:341343 6/19 (32%)
TM helix 5 286..315 CDD:341343 14/28 (50%)