DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and ghrhra

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001124524.1 Gene:ghrhra / 541314 ZFINID:ZDB-GENE-050315-2 Length:432 Species:Danio rerio


Alignment Length:391 Identity:134/391 - (34%)
Similarity:195/391 - (49%) Gaps:33/391 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 CLVQEHIEASTYGNDSGHCLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSKN-ATRFCHAN 98
            |:.....|...:...:| |.|.:|.|.||.....|.|..:.|.|..|  |..:::. ..|.|.:|
Zfish    36 CIQTRKREIKNHSQQTG-CGTDWDGIRCWHTANTGQLINVSCSDVFQ--HISNTQGFIYRNCVSN 97

  Fly    99 GTWEKYTNY-DACAHLPAPESVPEFEVIVELPTI--IYYIGYTLSLVSLSLALIVFAYFKELRCL 160
            |..:.|..| :|||.....||   ..|...|.|:  :|..||..||:||..|:|:|..|::..|.
Zfish    98 GWTDPYPPYEEACAFEDDSES---GTVTTYLSTLKQLYTAGYATSLISLITAVIIFTCFRKFHCT 159

  Fly   161 RNTIHANLFFTYIM--SALF--WILLLSVQIS---IRSGVGSCIALITLFHFFTLTNFFWMLVEG 218
            ||.||.|||.::|:  ||:|  ..:|.|.:..   :.|.| .|.:.:|.|.|..|||:||:||||
Zfish   160 RNYIHINLFVSFILRASAVFIKGTVLFSDETQDHCLMSTV-LCKSAVTFFQFCILTNYFWLLVEG 223

  Fly   219 LYLYMLVVKTFSGDNLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEKYEINCPW--MQETH 281
            |||..|:..||......|..|..||||.|::.:|.|.:         |.:.|:....|  ...|:
Zfish   224 LYLQTLLALTFVSQRKYFWWYILIGWGVPSVVLVVWVL---------TRQFYDNRGCWDDTDNTN 279

  Fly   282 VDWIYQGPVCAVLIINLTFLLRIMWVLITKLRSANT--VETRQYRKAAKALLVLIPLFGITYLVV 344
            :.||.:||:.|.|..|:...|.::.:|:.||:|...  .:|..:.:.||:.|.||||||:.|.:.
Zfish   280 IWWIIKGPITASLFTNIIIFLNVIRILVQKLKSPGVGGNDTGHFMRLAKSTLFLIPLFGMHYTLF 344

  Fly   345 LAGPSESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQLNQNRRY 409
            ...|..:|.:...:..|.  |.|.|||.|:|.|||||.||:..|:..:.||.....:...:.||.
Zfish   345 AFLPENTGEIIRFYIELG--LGSFQGFVVALLYCFLNGEVQAELKRRLWTWLTQTHLSPCKKRRV 407

  Fly   410 T 410
            |
Zfish   408 T 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 20/61 (33%)
7tmB1_DH_R 126..394 CDD:320391 102/280 (36%)
TM helix 1 129..153 CDD:320391 11/25 (44%)
TM helix 2 162..183 CDD:320391 10/24 (42%)
TM helix 3 197..219 CDD:320391 11/21 (52%)
TM helix 4 238..254 CDD:320391 7/15 (47%)
TM helix 5 279..302 CDD:320391 8/22 (36%)
TM helix 6 327..349 CDD:320391 10/21 (48%)
TM helix 7 356..381 CDD:320391 11/24 (46%)
ghrhraNP_001124524.1 HRM 50..113 CDD:280888 22/65 (34%)
7tm_2 125..371 CDD:278432 92/257 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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