DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and calcrla

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001004010.1 Gene:calcrla / 445508 ZFINID:ZDB-GENE-040822-26 Length:470 Species:Danio rerio


Alignment Length:391 Identity:121/391 - (30%)
Similarity:190/391 - (48%) Gaps:48/391 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSKNATRFCHANGTW-------EKYTNYDAC 110
            |...:|..|||..|..|..:...|.|..|  .:|.::..|:.|..:|.|       ..:||:..|
Zfish    73 CNRTWDGWLCWDDTEAGITSEQHCPDYFQ--DFDPTEMVTKICTESGQWFLHPESNRTWTNFTRC 135

  Fly   111 AHLPAPESVPEFEVIVELPTIIYY---IGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFTY 172
             :|...|.       ......::|   ||:.|||.||.::|.:|.:||.|.|.|.|:|.||||::
Zfish   136 -N
LHTTEG-------RRTAMNLFYLALIGHGLSLTSLFISLGIFFHFKSLSCQRITLHKNLFFSF 192

  Fly   173 IMSALFWILLLSV----QISIRSGVGSCIALITLFHFFTL-TNFFWMLVEGLYLYMLVVKTFSGD 232
            :::::..|:.|:.    |..::....|| .:....|.:.. .|:||||.||:||:.|:|.....:
Zfish   193 VLNSIITIIWLTAVANNQELVQQNPISC-KISQFIHLYIFGCNYFWMLCEGIYLHTLIVVAVFAE 256

  Fly   233 NLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEKYEINCPWMQETHVDWIYQGPVCAVLIIN 297
            ......|..:|||.|.:.....|||:|.        .|..||.....|.:.:|..||:||.:::|
Zfish   257 KQHLMWYYLLGWGFPLIPATIHAVARSY--------YYNDNCWISSNTSLLYIIHGPICAAMLVN 313

  Fly   298 LTFLLRIMWVLITKLRSANTVETRQYRKAAKALLVLIPLFGITYLVVLAGPSESGLMGHMFAVLR 362
            |.|||.|:.||||||:..:..::..|.||.:|.|:|:||.||.|:::...|| ..:...::..:.
Zfish   314 LFFLLNIVRVLITKLKVTHQAKSSLYMKAVRATLILVPLLGIQYVLLPYKPS-GRVSAEIYDYIM 377

  Fly   363 AVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQLN---------QNRRYTTKSFSKGG 418
            .:|:..||..|:..:||.|.||:..||.|   |...| ||..         ::..||..|.::..
Zfish   378 HILMHYQGLLVATIFCFFNGEVQAVLRRH---WNQYR-IQFGSTITQSDALRSASYTASSITEVQ 438

  Fly   419 G 419
            |
Zfish   439 G 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 18/65 (28%)
7tmB1_DH_R 126..394 CDD:320391 93/275 (34%)
TM helix 1 129..153 CDD:320391 10/26 (38%)
TM helix 2 162..183 CDD:320391 7/20 (35%)
TM helix 3 197..219 CDD:320391 7/22 (32%)
TM helix 4 238..254 CDD:320391 5/15 (33%)
TM helix 5 279..302 CDD:320391 9/22 (41%)
TM helix 6 327..349 CDD:320391 8/21 (38%)
TM helix 7 356..381 CDD:320391 6/24 (25%)
calcrlaNP_001004010.1 HRM 70..136 CDD:280888 18/65 (28%)
7tm_2 146..388 CDD:278432 84/251 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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