DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and Dh44-R2

DIOPT Version :10

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_610789.3 Gene:Dh44-R2 / 36368 FlyBaseID:FBgn0033744 Length:476 Species:Drosophila melanogaster


Alignment Length:390 Identity:220/390 - (56%)
Similarity:276/390 - (70%) Gaps:21/390 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LQCLVQ---EHIEASTYGNDSG-----HCLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSK 89
            |||..|   |..:||.....||     .|.:.|||:||||||..|:||||.|.:|.:|:|||::.
  Fly    56 LQCQQQQQREEEQASLEALASGGKRILQCPSSFDSVLCWPRTNAGSLAVLPCFEEFKGVHYDTTD 120

  Fly    90 NATRFCHANGTWEKYTNYDAC----AHLPAPESVPEFEVIVELPTIIYYIGYTLSLVSLSLALIV 150
            ||||||..||||:.|::||.|    ..:|.   ||:|...||||.|||..||.||..:|.:|||:
  Fly   121 NATRFCFPNGTWDHYSDYDRCHQNSGSIPV---VPDFSPNVELPAIIYAGGYFLSFATLVVALII 182

  Fly   151 FAYFKELRCLRNTIHANLFFTYIMSALFWILLLSVQ-ISIRSGVGSCIALITLFHFFTLTNFFWM 214
            |..||:|||||||||||||.|||.|||.|||.|.:| |:..|....||.|:.:|.:|.|||||||
  Fly   183 FLSFKDLRCLRNTIHANLFLTYITSALLWILTLFLQVITTESSQAGCITLVIMFQYFYLTNFFWM 247

  Fly   215 LVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEKY---EINCPW 276
            .|||||||.|||:|||.||:.|.|||.||||.||:.::.|::||:. ..:...|.:   ||:|.|
  Fly   248 FVEGLYLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWSIAKAF-APHLENEHFNGLEIDCAW 311

  Fly   277 MQETHVDWIYQGPVCAVLIINLTFLLRIMWVLITKLRSANTVETRQYRKAAKALLVLIPLFGITY 341
            |:|:|:|||::.|....|::||.||:|||||||||||||:|:|||||.||:||||||||||||||
  Fly   312 MRESHIDWIFKVPASLALLVNLVFLIRIMWVLITKLRSAHTLETRQYYKASKALLVLIPLFGITY 376

  Fly   342 LVVLAGPSESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQLNQN 406
            |:||.|| |.|:..::|..:||.|:|||||.|:|||||||||||..|||..:.||::|.|..|.:
  Fly   377 LLVLTGP-EQGISRNLFEAIRAFLISTQGFFVALFYCFLNSEVRQTLRHGFTRWRESRNIHRNSS 440

  Fly   407  406
              Fly   441  440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 35/63 (56%)
7tmB1_DH_R 126..394 CDD:320391 167/271 (62%)
TM helix 1 128..153 CDD:320391 14/24 (58%)
TM helix 2 162..184 CDD:320391 17/21 (81%)
TM helix 3 197..224 CDD:320391 18/26 (69%)
TM helix 4 236..256 CDD:320391 11/19 (58%)
TM helix 5 279..308 CDD:320391 15/28 (54%)
TM helix 6 322..349 CDD:320391 22/26 (85%)
TM helix 7 356..381 CDD:320391 15/24 (63%)
Dh44-R2NP_610789.3 HRM 82..144 CDD:397086 35/61 (57%)
7tmB1_DH_R 158..428 CDD:320391 167/271 (62%)
TM helix 1 160..185 CDD:320391 14/24 (58%)
TM helix 2 194..216 CDD:320391 17/21 (81%)
TM helix 3 230..257 CDD:320391 18/26 (69%)
TM helix 4 269..289 CDD:320391 11/19 (58%)
TM helix 5 314..343 CDD:320391 15/28 (54%)
TM helix 6 357..384 CDD:320391 23/27 (85%)
TM helix 7 390..415 CDD:320391 15/24 (63%)

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