DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and Sctr

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001012322.2 Gene:Sctr / 319229 MGIID:2441720 Length:464 Species:Mus musculus


Alignment Length:408 Identity:123/408 - (30%)
Similarity:196/408 - (48%) Gaps:37/408 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ASTYGNDSGHCLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSKNATRF--CHANGTWEKYT 105
            |.:|....| |...:|::.|||.:|......:.|...|:..   |.:|.:.|  |..:|..|.:.
Mouse    71 APSYTVHQG-CERFWDNMSCWPSSALAQTVEVPCPKFLRMF---SGRNGSLFRNCTKDGWSETFP 131

  Fly   106 NYD-AC-AHLPAPESVPEFEVIVELPTIIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANL 168
            ..| || .::....:......:::| .::|.:||:.||..|.:||.:...|:.|.|.||.||.:|
Mouse   132 RPDLACGVNMNGSFNERRHAYLLKL-KVMYTVGYSSSLAMLLVALSILCSFRRLHCTRNYIHMHL 195

  Fly   169 FFTYIMSALFWILLLSVQI---------SIRSGVGSCIALITLFHFFTLTNFFWMLVEGLYLYML 224
            |.::|:.||...:..:|..         :.|:|   |..::..|.:..:.|:.|:|||||||:.|
Mouse   196 FVSFILRALSNFIKDAVLFPADDVTYCDAHRAG---CKLVMIFFQYCIMANYAWLLVEGLYLHTL 257

  Fly   225 VVKTFSGDNLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEKYEINCPWMQETHVDWIYQGP 289
            :..:|..:......:...|||.||:||..|||.:.....:..   ::||    ....:.|:.:||
Mouse   258 LAISFFSERKCLQAFVLFGWGSPAIFVALWAVTRHFLEDFGC---WDIN----SNASIWWVIRGP 315

  Fly   290 VCAVLIINLTFLLRIMWVLITKLRSANT--VETRQYRKAAKALLVLIPLFGITYLVVLAGPSESG 352
            |...::||..|.:.|:.:|:.|||:..|  .||..|::.||:.|:|||||||.|:|....| |..
Mouse   316 VILSIVINFIFFINILRILMRKLRTQETRGNETHHYKRLAKSTLLLIPLFGIHYIVFAFSP-EGA 379

  Fly   353 LMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQLNQNRRYTTKSFSKG 417
            :...:|..|  .|.|.||..|::.|||||.||:..::   ..||.....:........:.|||..
Mouse   380 MEVQLFFEL--ALGSFQGLVVAVLYCFLNGEVQLEVQ---KKWRQWHLQEFPLRPVALSNSFSNA 439

  Fly   418 GGSPRAESMRPLTSYYGR 435
            ...| ..|.:..||...|
Mouse   440 TNGP-THSTKAGTSEQSR 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 17/63 (27%)
7tmB1_DH_R 126..394 CDD:320391 93/278 (33%)
TM helix 1 129..153 CDD:320391 8/23 (35%)
TM helix 2 162..183 CDD:320391 8/20 (40%)
TM helix 3 197..219 CDD:320391 6/21 (29%)
TM helix 4 238..254 CDD:320391 7/15 (47%)
TM helix 5 279..302 CDD:320391 7/22 (32%)
TM helix 6 327..349 CDD:320391 12/21 (57%)
TM helix 7 356..381 CDD:320391 10/24 (42%)
SctrNP_001012322.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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