DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and pth3r

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_571453.1 Gene:pth3r / 30651 ZFINID:ZDB-GENE-991123-12 Length:542 Species:Danio rerio


Alignment Length:471 Identity:146/471 - (30%)
Similarity:227/471 - (48%) Gaps:76/471 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 HCLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSKN--ATRFCHANGTWEK-------YTNY 107
            :|..::|.|:|||......:..:.|.:.:    ||.:..  |.|.|.|:|.||:       :.||
Zfish    60 NCAPEWDGIICWPTGKPNQMVAVLCPEYI----YDFNHRGYAYRHCDASGNWEQVSIINRTWANY 120

  Fly   108 DAC-AHLPAPESVPEFEVIVELPTIIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFT 171
            ..| .:|....|  :.|.:.|...::|.|||::||.:|.:|:.:..|||.|.|.||.||.:||.:
Zfish   121 TECTTYLHTNHS--DQEEVFERLYLMYTIGYSISLAALLVAVSILCYFKRLHCTRNYIHIHLFTS 183

  Fly   172 YIMSALFWILLLSVQISI-------------RSGVGSCIALITLFHFFTLTNFFWMLVEGLYLYM 223
            :|..|:...:..:|..::             |..|| |.|.:|||.:...||.:|:|||||||:.
Zfish   184 FICRAISIFVKDAVLYAVTNDGELEDGAVEQRPMVG-CKAAVTLFLYLLATNHYWILVEGLYLHS 247

  Fly   224 LVVKTFSGDNLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEKYEINCPWMQETHVDWIYQG 288
            |:...|..|.........||||.||:||..|..|:   |:.:..:.::|:.     .::.||||.
Zfish   248 LIFMAFLSDKNCLWALTIIGWGIPAVFVSIWVSAR---VSLADTQCWDISA-----GNLKWIYQV 304

  Fly   289 PVCAVLIINLTFLLRIMWVLITKLRSANTVE---TRQYRKAAKALLVLIPLFGITYLVVLAGP-- 348
            |:.|.:::|....|.|:.||.:||...||.:   .:||||..|:.:||:||||:.|::.:|.|  
Zfish   305 PILAAIVVNFFLFLNIIRVLASKLWETNTGKLDPRQQYRKLLKSTMVLMPLFGVHYMLFMALPYT 369

  Fly   349 SESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTW-RDTRTIQLNQNRRYTTK 412
            ..:||:..:......:..|:|||.|:..|||.|.||:..::   ..| |.:..:.|.|..|..: 
Zfish   370 DVTGLLWQIQMHYEMLFNSSQGFFVAFIYCFCNGEVQAEVK---KAWLRRSLALDLKQKARVHS- 430

  Fly   413 SFSKGGGSPRAESMRPLTSYYGRGKRESCVSSATTTTLVGQHAPLSLHRGSNNALHTMPTLAANA 477
              |.|.||          .|||.      :.|.|||    |...||:......  |::.|:.|..
Zfish   431 --SAGCGS----------GYYGG------MMSHTTT----QSVCLSVSGAKGG--HSLHTIGAKG 471

  Fly   478 MS----SGSTLSVMPR 489
            .|    ||:.....|:
Zfish   472 QSHLQHSGNLPGYAPQ 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 19/69 (28%)
7tmB1_DH_R 126..394 CDD:320391 98/285 (34%)
TM helix 1 129..153 CDD:320391 8/23 (35%)
TM helix 2 162..183 CDD:320391 7/20 (35%)
TM helix 3 197..219 CDD:320391 10/21 (48%)
TM helix 4 238..254 CDD:320391 8/15 (53%)
TM helix 5 279..302 CDD:320391 7/22 (32%)
TM helix 6 327..349 CDD:320391 10/23 (43%)
TM helix 7 356..381 CDD:320391 8/24 (33%)
pth3rNP_571453.1 HRM 61..126 CDD:367186 19/68 (28%)
7tmB1_PTH3R 138..415 CDD:320649 99/288 (34%)
TM helix 1 140..165 CDD:320649 8/24 (33%)
TM helix 2 174..196 CDD:320649 7/21 (33%)
TM helix 3 221..248 CDD:320649 14/26 (54%)
TM helix 4 260..280 CDD:320649 9/19 (47%)
TM helix 5 295..324 CDD:320649 9/33 (27%)
TM helix 6 341..368 CDD:320649 13/26 (50%)
TM helix 7 377..402 CDD:320649 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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