DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and Vipr2

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_058934.2 Gene:Vipr2 / 29555 RGDID:3962 Length:437 Species:Rattus norvegicus


Alignment Length:430 Identity:127/430 - (29%)
Similarity:202/430 - (46%) Gaps:75/430 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSKNATRFCHANGTWEKYTNY-DACAHL-PA 115
            |...:|:|.||.....|....:.|....... |....|.::.|.::|..|.:.:: |||.:. |.
  Rat    51 CSGVWDNITCWRPADIGETVTVPCPKVFSNF-YSRPGNISKNCTSDGWSETFPDFIDACGYNDPE 114

  Fly   116 PESVPEFEVIVELPTIIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMSALFWI 180
            .||...|.::|:   .||.:||::||:||:...|:...|::|.|.||.||.|||.::::.|:..:
  Rat   115 DESKITFYILVK---AIYTLGYSVSLMSLTTGSIIICLFRKLHCTRNYIHLNLFLSFMLRAISVL 176

  Fly   181 LLLSVQIS----IR------SGVGSCIALITLFHFFTLTNFFWMLVEGLYLYMLVVKTFSGDNLR 235
            :..||..|    :|      |.||..::|: .|.:..:.||:|:|||||||:.|:|........ 
  Rat   177 VKDSVLYSSSGTLRCHDQPGSWVGCKLSLV-FFQYCIMANFYWLLVEGLYLHTLLVAILPPSRC- 239

  Fly   236 FNIYASIGWGGPALFVVTW-AVAKSL--TVTYSTPEKYEINCPWMQETHVDWIYQGPVCAVLIIN 297
            |..|..||||.|::.:..| |...||  |..:.|.:.   :.||       |:.:.|:...:::|
  Rat   240 FLAYLLIGWGIPSVCIGAWIATRLSLEDTGCWDTNDH---SIPW-------WVIRMPILISIVVN 294

  Fly   298 LTFLLRIMWVLITKLRSANT--VETRQYRKAAKALLVLIPLFGITYLVVLAGPSESGLMGHMFAV 360
            ....:.|:.:|:.||.|.:.  .:..||::.||:.|:||||||:.|:|..|.|  .|:......:
  Rat   295 FALFISIVRILLQKLTSPDVGGNDQSQYKRLAKSTLLLIPLFGVHYMVFAAFP--IGISSTYQIL 357

  Fly   361 LRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQLNQ--NRRYTTKSFSKGGGSPRA 423
            ....:.|.||..|::.||||||||:..|:..   ||.   :.|.|  :|.|...|:|....    
  Rat   358 FELCVGSFQGLVVAVLYCFLNSEVQCELKRR---WRG---LCLTQPGSRDYRLHSWSMSRN---- 412

  Fly   424 ESMRPLTSYYGRGKRESCVSSATTTTLVGQHAPLSLHRGS 463
                                        |..:.|.:||||
  Rat   413 ----------------------------GSESALQIHRGS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 15/59 (25%)
7tmB1_DH_R 126..394 CDD:320391 94/282 (33%)
TM helix 1 129..153 CDD:320391 9/23 (39%)
TM helix 2 162..183 CDD:320391 7/20 (35%)
TM helix 3 197..219 CDD:320391 8/21 (38%)
TM helix 4 238..254 CDD:320391 6/15 (40%)
TM helix 5 279..302 CDD:320391 3/22 (14%)
TM helix 6 327..349 CDD:320391 12/21 (57%)
TM helix 7 356..381 CDD:320391 7/24 (29%)
Vipr2NP_058934.2 HormR 47..117 CDD:214468 16/66 (24%)
7tmB1_VIP-R2 122..390 CDD:320652 94/287 (33%)
TM helix 1 125..149 CDD:320652 10/26 (38%)
TM helix 2 158..179 CDD:320652 7/20 (35%)
TM helix 3 202..224 CDD:320652 8/22 (36%)
TM helix 4 242..258 CDD:320652 6/15 (40%)
TM helix 5 276..299 CDD:320652 5/32 (16%)
TM helix 6 326..348 CDD:320652 13/23 (57%)
TM helix 7 353..378 CDD:320652 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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