DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh44-R1 and Gipr

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_036846.1 Gene:Gipr / 25024 RGDID:2689 Length:455 Species:Rattus norvegicus


Alignment Length:438 Identity:127/438 - (28%)
Similarity:201/438 - (45%) Gaps:83/438 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSKNATRFCHANGTWEKYTNYDACAHLPAPE 117
            |...||...||..||..|.|.:.|...|......::....|.|.::|.|..:.::..|.:   ||
  Rat    58 CNGSFDMYACWNYTAANTTARVSCPWYLPWYRQVAAGFVFRQCGSDGQWGSWRDHTQCEN---PE 119

  Fly   118 SVPEFE---VIVELPTIIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMSA--- 176
            ....|:   :|:|...::|.:||:|||.:|.|||::.:.|:.|.|.||.||.|||.::::.|   
  Rat   120 KNGAFQDQKLILERLQVVYTVGYSLSLATLLLALLILSLFRRLHCTRNYIHMNLFTSFMLRAGAI 184

  Fly   177 -------------------LFWILLLSVQISIRSGVGSCIALITLFHFFTLTNFFWMLVEGLYLY 222
                               ..|          ...:.:|.....|..:....|:.|:||||:||:
  Rat   185 LTRDQLLPPLGPYTGNQTPTLW----------NQALAACRTAQILTQYCVGANYTWLLVEGVYLH 239

  Fly   223 MLVVKTFSGDNLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEKYEINCPWMQETHVDWIYQ 287
            .|:|.....:...|..|..:|||.|||||:.|.:.:.|.......|:.|:...|       ||.:
  Rat   240 HLLVVVRRSEKGHFRCYLLLGWGAPALFVIPWVIVRYLYENTQCWERNEVKAIW-------WIIR 297

  Fly   288 GPVCAVLIINLTFLLRIMWVLITKLRSANTVETRQYR------KAAKALLVLIPLFGITYLVVLA 346
            .|:...::||....:||:.:|::|||      |||.|      :.|::.|.|:||.|: :.||.|
  Rat   298 TPILITILINFLIFIRILGILVSKLR------TRQMRCPDYRLRLARSTLTLMPLLGV-HEVVFA 355

  Fly   347 GPSESGLMGHM-FAVL--RAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQLNQNRR 408
            ..:|....|.: ||.|  ...|.|.|||.||:.|||:|.||::.:|      |...::|....|.
  Rat   356 PVTEEQAEGSLRFAKLAFEIFLSSFQGFLVSVLYCFINKEVQSEIR------RLRLSLQEQCPRP 414

  Fly   409 YTTKSFSKGGGSPRAESMRPLTSYYGRGKRESCVSSATTTTLVGQHAP 456
            :.       |.:|||.   ||:|    ..:|:.:.:|..:.::  |.|
  Rat   415 HL-------GQAPRAV---PLSS----APQEAAIRNALPSGML--HVP 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 16/58 (28%)
7tmB1_DH_R 126..394 CDD:320391 93/298 (31%)
TM helix 1 129..153 CDD:320391 10/23 (43%)
TM helix 2 162..183 CDD:320391 8/42 (19%)
TM helix 3 197..219 CDD:320391 6/21 (29%)
TM helix 4 238..254 CDD:320391 9/15 (60%)
TM helix 5 279..302 CDD:320391 5/22 (23%)
TM helix 6 327..349 CDD:320391 9/21 (43%)
TM helix 7 356..381 CDD:320391 13/27 (48%)
GiprNP_036846.1 HRM 55..118 CDD:280888 16/62 (26%)
7tm_2 131..385 CDD:278432 84/277 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.