DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh44-R1 and Vipr2

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_033537.1 Gene:Vipr2 / 22355 MGIID:107166 Length:437 Species:Mus musculus


Alignment Length:462 Identity:130/462 - (28%)
Similarity:211/462 - (45%) Gaps:84/462 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SVELQCLVQEHIE-----------ASTYGNDSGHCLTQFDSILCWPRTARGTLAVLQCMDELQGI 83
            |:..:|  :.|:|           .|:...:...|...:|:|.||.....|....:.|.......
Mouse    19 SIHPEC--RFHLEIQEEETKCAELLSSQTENQRACSGVWDNITCWRPADVGETVTVPCPKVFSNF 81

  Fly    84 HYDSSKNATRFCHANGTWEKYTNY-DACAHL-PAPESVPEFEVIVELPTIIYYIGYTLSLVSLSL 146
             |....|.::.|.::|..|.:.:: |||.:. |..||...|.::|:   .||.:||::||:||:.
Mouse    82 -YSRPGNISKNCTSDGWSETFPDFIDACGYNDPEDESKISFYILVK---AIYTLGYSVSLMSLTT 142

  Fly   147 ALIVFAYFKELRCLRNTIHANLFFTYIMSALFWILLLSVQIS----IR------SGVGSCIALIT 201
            ..|:...|::|.|.||.||.|||.::::.|:..::..||..|    :|      |.||..::|: 
Mouse   143 GSIIICLFRKLHCTRNYIHLNLFLSFMLRAISVLVKDSVLYSSSGLLRCHDQPASWVGCKLSLV- 206

  Fly   202 LFHFFTLTNFFWMLVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGPALFVVTWAVAK-SL--TVT 263
            .|.:..:.||:|:|||||||:.|:|........ |..|..||||.|::.:..|...: ||  |..
Mouse   207 FFQYCIMANFYWLLVEGLYLHTLLVAILPPSRC-FLAYLLIGWGIPSVCIGAWTATRLSLEDTGC 270

  Fly   264 YSTPEKYEINCPWMQETHVDWIYQGPVCAVLIINLTFLLRIMWVLITKLRSANT--VETRQYRKA 326
            :.|.:.   :.||       |:.:.|:...:::|....:.|:.:|:.||.|.:.  .:..||::.
Mouse   271 WDTNDH---SIPW-------WVIRMPILISIVVNFALFISIVRILLQKLTSPDVGGNDQSQYKRL 325

  Fly   327 AKALLVLIPLFGITYLVVLAGPSESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHH 391
            ||:.|:||||||:.|:|..|.|  .|:......:....:.|.||..|::.||||||||:..|:..
Mouse   326 AKSTLLLIPLFGVHYMVFAAFP--IGISSTYQILFELCVGSFQGLVVAVLYCFLNSEVQCELKRR 388

  Fly   392 ISTWRDTRTIQLNQNRRYTTKSFSKGGGSPRAESMRPLTSYYGRGKRESCVSSATTTTLVGQHAP 456
               ||.....|.. :|.|...|:|....                                |..:.
Mouse   389 ---WRGLCLTQAG-SRDYRLHSWSMSRN--------------------------------GSESA 417

  Fly   457 LSLHRGS 463
            |.:||||
Mouse   418 LQIHRGS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 15/60 (25%)
7tmB1_DH_R 126..394 CDD:320391 93/282 (33%)
TM helix 1 129..153 CDD:320391 9/23 (39%)
TM helix 2 162..183 CDD:320391 7/20 (35%)
TM helix 3 197..219 CDD:320391 8/21 (38%)
TM helix 4 238..254 CDD:320391 6/15 (40%)
TM helix 5 279..302 CDD:320391 3/22 (14%)
TM helix 6 327..349 CDD:320391 12/21 (57%)
TM helix 7 356..381 CDD:320391 7/24 (29%)
Vipr2NP_033537.1 HormR 47..117 CDD:214468 16/70 (23%)
7tm_2 122..370 CDD:278432 83/264 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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