DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and seb-2

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001122749.1 Gene:seb-2 / 191374 WormBaseID:WBGene00014035 Length:522 Species:Caenorhabditis elegans


Alignment Length:395 Identity:95/395 - (24%)
Similarity:170/395 - (43%) Gaps:54/395 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DSGHCLTQFDSILCWPRTARGTLAVLQCMDELQG---IHYDSSKNATRFCHANGTW--------- 101
            |...|...:|...|:.....| :...||.:.:.|   |..|..:.:.:.|.:|| |         
 Worm   142 DDSPCPPTWDGWNCFDSATPG-VVFKQCPNYIYGGSNIKTDYDRLSQKVCRSNG-WATPEVNAAA 204

  Fly   102 EKYTNYDACAHLPAPESVPEFEVIVELPTIIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTI-H 165
            .::|:|..|    ......|..::..|.|      |:.|::.|..|:.:....:.:||....| |
 Worm   205 REHTDYTGC----MSNGDVEARILAGLLT------YSASVIFLIPAVFLLTLLRPIRCQPMFILH 259

  Fly   166 ANLFFTYIMSALFWILLLSVQISIRSGVGS--------CIALITL-FHFFTLTNFFWMLVEGLYL 221
            .:|..:.::...|:::.:|:.:...:.:.|        |..|.:: ..:..||||.|||.|.:||
 Worm   260 RHLLISCLLYGAFYLITVSLFVVNDAPLSSQVFQNHLFCRLLFSIQLRYLRLTNFTWMLAEAVYL 324

  Fly   222 YMLV--VKTFSGDNLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEKYEINCPWMQETHV-- 282
            :.|:  .:...|:.||  .|..|.||.|.:..|.:...:||        ..::...|::.:.|  
 Worm   325 WRLLHTAQHSEGETLR--SYKVICWGVPGVITVVYIFVRSL--------NDDVGMCWIENSTVAW 379

  Fly   283 -DWIYQGPVCAVLIINLTFLLRIMWVLITKLRSANTVETRQYRKAAKALLVLIPLFGITYLVVLA 346
             :|:...|....:.:||..|..|:::|:.|||....:|..|||||.:..|:|||:||:..|:.:.
 Worm   380 IEWMIITPSLLAMGVNLLLLGLIVYILVKKLRCDPHLERIQYRKAVRGALMLIPVFGVQQLLTIY 444

  Fly   347 GPSESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQLNQNRRYTT 411
            ..|.:     .:.|....|...||..||...|:.|..|...:....|:.::.|.:.....:|.:.
 Worm   445 RFSNT-----YYQVTDQSLNGLQGMFVSFIVCYTNRSVVECVLKFWSSHQEKRALGAECRQRMSI 504

  Fly   412 KSFSK 416
            :...|
 Worm   505 QESGK 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 16/71 (23%)
7tmB1_DH_R 126..394 CDD:320391 73/282 (26%)
TM helix 1 129..153 CDD:320391 5/23 (22%)
TM helix 2 162..183 CDD:320391 4/21 (19%)
TM helix 3 197..219 CDD:320391 9/22 (41%)
TM helix 4 238..254 CDD:320391 6/15 (40%)
TM helix 5 279..302 CDD:320391 5/25 (20%)
TM helix 6 327..349 CDD:320391 7/21 (33%)
TM helix 7 356..381 CDD:320391 7/24 (29%)
seb-2NP_001122749.1 HormR 142..222 CDD:214468 18/85 (21%)
7tm_4 230..466 CDD:304433 66/250 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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