DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh44-R1 and Gcgr

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_017169752.1 Gene:Gcgr / 14527 MGIID:99572 Length:497 Species:Mus musculus


Alignment Length:414 Identity:118/414 - (28%)
Similarity:195/414 - (47%) Gaps:74/414 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 GIHYDSSKNATRF--CHANGTW------EKYTNYDACAHLPAPESVPEFEVIVE--------LPT 130
            |.:..::|:...|  |..:|.|      :.:.|...|       .:.:.|:.|:        ...
Mouse    98 GTYLGTTKHRLVFKRCGPDGQWVRGPRGQPWRNASQC-------QLDDEEIEVQKGVAKMYSSQQ 155

  Fly   131 IIYYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMSA-----LFWILL-------- 182
            ::|.:||:|||.:|.|||::....::|.|.||.||.|||.::::.|     :.|:|.        
Mouse   156 VMYTVGYSLSLGALLLALVILLGLRKLHCTRNYIHGNLFASFVLKAGSVLVIDWLLKTRYSQKIG 220

  Fly   183 --LSVQISIRSG-VGSCIALITLFHFFTLTNFFWMLVEGLYLY-MLVVKTFSGDNLRFNIYASIG 243
              |||.:.:..| :..|.....:..:..:.|:.|:||||:||| :|.:.||| :...|::|..||
Mouse   221 DDLSVSVWLSDGAMAGCRVATVIMQYGIIANYCWLLVEGVYLYSLLSLATFS-ERSFFSLYLGIG 284

  Fly   244 WGGPALFVVTWAVAKSLTVTYSTPEKYE-INCPWMQETHVD--WIYQGPVCAVLIINLTFLLRIM 305
            ||.|.|||:.|.|.|.|         :| :.| |....::.  ||.:.||...|:||....:.|:
Mouse   285 WGAPLLFVIPWVVVKCL---------FENVQC-WTSNDNMGFWWILRIPVFLALLINFFIFVHII 339

  Fly   306 WVLITKLRSANTVETRQYR-KAAKALLVLIPLFGITYLVVLAGPSESGLMGHMFAVLRAV----- 364
            .:|:.||| |:.:....|: :.|::.|.||||.|: :.||.|..::.    |....||:.     
Mouse   340 HLLVAKLR-AHQMHYADYKFRLARSTLTLIPLLGV-HEVVFAFVTDE----HAQGTLRSTKLFFD 398

  Fly   365 --LLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTRTIQLNQNRRYTTKSFSKGG---GSPRAE 424
              |.|.||..|::.|||||.||:..|......|::.:.:|..:.........:..|   |.| .|
Mouse   399 LFLSSFQGLLVAVLYCFLNKEVQAELMRRWRQWQEGKALQEERLASSHGSHMAPAGPCHGDP-CE 462

  Fly   425 SMRPLTSYYGRGKRESCVSSATTT 448
            .::.:::  |......||.|..|:
Mouse   463 KLQLMSA--GSSSGTGCVPSMETS 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 8/37 (22%)
7tmB1_DH_R 126..394 CDD:320391 98/303 (32%)
TM helix 1 129..153 CDD:320391 10/23 (43%)
TM helix 2 162..183 CDD:320391 9/35 (26%)
TM helix 3 197..219 CDD:320391 5/21 (24%)
TM helix 4 238..254 CDD:320391 9/15 (60%)
TM helix 5 279..302 CDD:320391 7/24 (29%)
TM helix 6 327..349 CDD:320391 10/21 (48%)
TM helix 7 356..381 CDD:320391 11/31 (35%)
GcgrXP_017169752.1 7tmB1_GCGR 149..429 CDD:320395 97/296 (33%)
TM helix 1 154..178 CDD:320395 10/23 (43%)
TM helix 2 187..208 CDD:320395 7/20 (35%)
TM helix 3 238..260 CDD:320395 5/21 (24%)
TM helix 4 279..295 CDD:320395 9/15 (60%)
TM helix 5 313..336 CDD:320395 7/22 (32%)
TM helix 6 358..383 CDD:320395 10/25 (40%)
TM helix 7 392..417 CDD:320395 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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