DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh44-R1 and Calcr

DIOPT Version :10

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_446268.2 Gene:Calcr / 116506 RGDID:621001 Length:533 Species:Rattus norvegicus


Alignment Length:437 Identity:122/437 - (27%)
Similarity:207/437 - (47%) Gaps:82/437 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 YGNDSGHCLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSKNATRFCHANGTW-------EK 103
            |..:..:|...:|..:||..|..|.::...|.|...  .:|.::..:::|..||.|       ..
  Rat    82 YEGEGPYCNRTWDGWMCWDDTPAGVMSYQHCPDYFP--DFDPTEKVSKYCDENGEWFRHPDSNRT 144

  Fly   104 YTNYDACAHLPAPESVPEFEVIVELPTIIYY---IGYTLSLVSLSLALIVFAYFKELRCLRNTIH 165
            ::||..| :...|:.:..       ..::||   :|:::|:.:|..::.:|.:||.|.|.|.|:|
  Rat   145 WSNYTLC-NAFTPDKLHN-------AYVLYYLALVGHSMSIAALIASMGIFLFFKNLSCQRVTLH 201

  Fly   166 ANLFFTYIMSALF---------------------------------WILLLSVQISIRSG----- 192
            .|:|.|||::::.                                 |.|...:.:|...|     
  Rat   202 KNMFLTYILNSIIIIIHLVEVVPNGDLVRRDPMHIFHHNTYMWTMQWELSPPLPLSAHEGKMDPH 266

  Fly   193 ---VGSCIALITLFHFFTLT-NFFWMLVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGPALFVVT 253
               |.|| .::..||.:.:. |:||||.||:||:.|:|.....::.|...|..:|||.|.:..:.
  Rat   267 DSEVISC-KILHFFHQYMMACNYFWMLCEGIYLHTLIVMAVFTEDQRLRWYYLLGWGFPIVPTII 330

  Fly   254 WAVAKSLTVTYSTPEKYEINCPWMQ-ETHVDWIYQGPVCAVLIINLTFLLRIMWVLITKLRSANT 317
            .|:.:::        .|..|| |:. |||:.:|..|||.|.|::|..|||.|:.||:||:|..:.
  Rat   331 HAITRAV--------YYNDNC-WLSTETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRQTHE 386

  Fly   318 VETRQYRKAAKALLVLIPLFGITYLVVLAGPSESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNS 382
            .|...|.||.||.:||:||.||.::|....||.. ::|.::..|...|:..|||.|:..|||.|.
  Rat   387 AEAYMYLKAVKATMVLVPLLGIQFVVFPWRPSNK-VLGKIYDYLMHSLIHFQGFFVATIYCFCNH 450

  Fly   383 EVRNALRHHISTWRDTRTIQLNQNRRYTTK--------SFSKGGGSP 421
            ||:..|:...:.::...:.:..:.||.|.:        :|::.||.|
  Rat   451 EVQVTLKRQWAQFKIQWSHRWGRRRRPTNRVVSAPRAVAFAEPGGLP 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 16/66 (24%)
7tmB1_DH_R 126..394 CDD:320391 97/313 (31%)
TM helix 1 128..153 CDD:320391 6/27 (22%)
TM helix 2 162..184 CDD:320391 9/54 (17%)
TM helix 3 197..224 CDD:320391 11/27 (41%)
TM helix 4 236..256 CDD:320391 5/19 (26%)
TM helix 5 279..308 CDD:320391 14/28 (50%)
TM helix 6 322..349 CDD:320391 12/26 (46%)
TM helix 7 356..381 CDD:320391 9/24 (38%)
CalcrNP_446268.2 HRM 86..154 CDD:397086 16/70 (23%)
7tmB1_calcitonin_R 162..472 CDD:341343 97/320 (30%)
TM helix 1 164..189 CDD:341343 6/24 (25%)
TM helix 2 198..220 CDD:341343 7/21 (33%)
TM helix 3 274..301 CDD:341343 11/26 (42%)
TM helix 4 313..333 CDD:341343 5/19 (26%)
TM helix 5 348..377 CDD:341343 14/28 (50%)
TM helix 6 391..418 CDD:341343 12/26 (46%)
TM helix 7 424..449 CDD:341343 9/24 (38%)

Return to query results.
Submit another query.