DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R1 and vipr1a

DIOPT Version :9

Sequence 1:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_002660843.2 Gene:vipr1a / 100334247 ZFINID:ZDB-GENE-070912-506 Length:440 Species:Danio rerio


Alignment Length:426 Identity:123/426 - (28%)
Similarity:210/426 - (49%) Gaps:41/426 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SDPLLDLHNLDGIGESVELQ-CLVQEHIEA------STYGNDSGHCLTQFDSILCWPRTARGTLA 72
            |..:|.|:....:|..:.:| |.|...:||      |...|.:..|..::| :.|||....|.:.
Zfish     4 SKQMLILYLTCSLGPMLSVQMCEVMWELEAEKRECLSKLENITSGCTGEWD-LACWPSARIGEVV 67

  Fly    73 VLQCMDELQGIHYDSSKNATRFCHANGTWEKYTN----YDACAHLPAPESVPEFEVIVELPTII- 132
            .:.|.:....:. |...|.::.|.|:| |.:..:    |: |.:.|   ::.|...:.|..:.: 
Zfish    68 TIPCPNYFSHVS-DQIGNISKSCTADG-WTEINSVVVAYN-CGYDP---NITEDGNMGEFLSSVR 126

  Fly   133 --YYIGYTLSLVSLSLALIVFAYFKELRCLRNTIHANLFFTYIMSALFWILLLSVQISIRS---- 191
              |.||:|:||:||.:|:|:..:|::|.|.||.||.:||.::|:.|:..|:...|...:..    
Zfish   127 TGYTIGHTVSLISLIIAIIILCFFRKLHCTRNYIHIHLFMSFILKAVAVIMKDVVLYEVEEPDDC 191

  Fly   192 --GVGSCIALITLFHFFTLTNFFWMLVEGLYLYMLVVKTFSGDNLRFNIYASIGWGGPALFVVTW 254
              |...|.|.:..|.:..:.:|||:|||||||:.|:..:|..:...|..|..||||.|.:|:..|
Zfish   192 HYGSVGCKAAMVFFQYGVMASFFWLLVEGLYLHALLAVSFFSERKYFWWYILIGWGVPGVFITIW 256

  Fly   255 AVAKSLTVTYSTPEKYEINCPWMQETHVDWIYQGPVCAVLIINLTFLLRIMWVLITKL--RSANT 317
            ::.|:..        ::|.|....:..:.||.:.|....:::|....:.|:.:|..|:  |....
Zfish   257 SITKAYL--------HDIGCWDFIDDDLWWIIKTPTLITILMNFILFICIIRILRQKISCRDIGR 313

  Fly   318 VETRQYRKAAKALLVLIPLFGITYLVVLAGPSESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNS 382
            .|:.||.:.||:.|:|||||||.|::....|..  :..::..|...:|.|.|||.|::.|||||.
Zfish   314 NESHQYSRLAKSTLLLIPLFGINYIIFAFMPHH--IQSYIRLVFDLILGSFQGFCVAVLYCFLNG 376

  Fly   383 EVRNALRHHISTWRDTRTIQLNQNRRYTTKSFSKGG 418
            ||::.::.....|...|.  |..:.:|...|.:..|
Zfish   377 EVQSEIKRKWRRWHMQRF--LGADTKYHQPSTASNG 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 15/63 (24%)
7tmB1_DH_R 126..394 CDD:320391 89/278 (32%)
TM helix 1 129..153 CDD:320391 10/26 (38%)
TM helix 2 162..183 CDD:320391 8/20 (40%)
TM helix 3 197..219 CDD:320391 8/21 (38%)
TM helix 4 238..254 CDD:320391 7/15 (47%)
TM helix 5 279..302 CDD:320391 4/22 (18%)
TM helix 6 327..349 CDD:320391 11/21 (52%)
TM helix 7 356..381 CDD:320391 10/24 (42%)
vipr1aXP_002660843.2 HRM 46..>96 CDD:280888 13/52 (25%)
7tm_2 122..367 CDD:278432 80/254 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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