DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp50e and Obp58c

DIOPT Version :9

Sequence 1:NP_610959.2 Gene:Obp50e / 36600 FlyBaseID:FBgn0033931 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_611710.1 Gene:Obp58c / 37608 FlyBaseID:FBgn0034769 Length:199 Species:Drosophila melanogaster


Alignment Length:205 Identity:41/205 - (20%)
Similarity:74/205 - (36%) Gaps:36/205 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KYIICFGFLLIILECSLASFNCSAPPNFNNFDINTCCRTPELDMGDVPQKCHKYVSGLKSANSKY 67
            |..|...|..:|........:|......|...|:.||:.|: ...|:.:.|      .:..|...
  Fly     2 KCTILLSFFSLIWFAGGIKIDCENTEAINEDHIHYCCKHPD-GHNDLIEGC------ARETNFTL 59

  Fly    68 PSYAH--------------LCYPDCIYRETGAMVNGKIKVNRVKQYLEEHVHRRDQEIVSHIVQS 118
            |:...              .|:..|::.:...|.:..:.::.|:....|. ...|.|....::.:
  Fly    60 PNQNEEALVDITADRAIRGTCFGKCVFSKLNLMKDNNLDMDAVRSLFTER-FPDDPEYAKEMINA 123

  Fly   119 FESCLSNVKGHMKS-------LNIESYKVL-PHGCSPFAGIIYSCVNAETFLNCPQQMWKNEKPC 175
            |:.|      |.||       |:...:|.: ...|.|.:.::.:||..:.|.|||...|...|.|
  Fly   124 FDHC------HGKSEENTSMFLSKPLFKQMSKQFCDPKSSVVLACVIRQFFHNCPADRWSKTKEC 182

  Fly   176 NLAKQFAEQC 185
            .....|:::|
  Fly   183 EDTLAFSKKC 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp50eNP_610959.2 None
Obp58cNP_611710.1 PBP_GOBP 47..135 CDD:299791 15/100 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472889
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.