DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp50e and Obp50b

DIOPT Version :9

Sequence 1:NP_610959.2 Gene:Obp50e / 36600 FlyBaseID:FBgn0033931 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_725386.1 Gene:Obp50b / 246435 FlyBaseID:FBgn0050073 Length:238 Species:Drosophila melanogaster


Alignment Length:179 Identity:39/179 - (21%)
Similarity:66/179 - (36%) Gaps:51/179 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DMGDVPQKC------HK--YVSGLKSANSKYPSYAHLCYP----------DCIYRETGAMVNGKI 91
            |||.: |||      ||  |..| ||...|:|.....|.|          :|:||... :::...
  Fly    23 DMGGL-QKCTELLNTHKLVYCCG-KSFLDKFPFVGSNCTPFWDDYGPCRYECLYRHWD-LLDQDN 84

  Fly    92 KVNRVKQYLEEHVHRRDQEIVSHIVQ--------------SFESCLSNVKGHMKSLNIESYKV-- 140
            |:.:.:.||          :::.:..              :.|:|.:....|...|.:.|.:|  
  Fly    85 KIKKPELYL----------MITSLYSPLNGYDKYGAAFKAAHETCEALGSRHADFLLLYSNQVAD 139

  Fly   141 ----LPHGCSPFAGIIYSCVNAETFLNCPQQMWKNEKPCNLAKQFAEQC 185
                ....|.|:|.:...|.......|||::.|.::..||..::....|
  Fly   140 KMGMASSTCLPYAMLHAQCTMVYLTANCPRENWIDDPKCNSLQKLLSSC 188



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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