Sequence 1: | NP_001246321.1 | Gene: | Tfb1 / 36598 | FlyBaseID: | FBgn0033929 | Length: | 585 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_594223.2 | Gene: | tfb1 / 2542336 | PomBaseID: | SPAC16E8.11c | Length: | 533 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 575 | Identity: | 132/575 - (22%) |
---|---|---|---|
Similarity: | 236/575 - (41%) | Gaps: | 128/575 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 YKKGDGTLYVMNERVAWMAEHRDTVTVSHRYADIKTQKISPEGKPKVQLQV--VLHDGNTST--- 76
Fly 77 FHFV---NRQGQAAMLADRDKVKELLQQLLPNFKRK-------------VDKDLEDKNRILVENP 125
Fly 126 NLLQLYKDLVITKVLTSDEFWATH---AKDHALKKMGRSQEIGVSGAFLADIKPQTDGCNGLKYN 187
Fly 188 LTSDVIHCIFKTYPAVKRKHFENVPAKMSEAEFWTKFFQSHYFHR---DRLTA--GTKDIFTECG 247
Fly 248 KIDDQALKAAVQQGAGDPLLDLKKFEDVPLEEGFGSVAGDRNVVNSGNIVHQ------------- 299
Fly 300 -NMIKRFNQHSIMVL-------KTCANVTSAPSTMTNGTNNANGPVSQSAYTNGMNGKGQATATA 356
Fly 357 TKSSSDQVDKDEPQSKKQRLMEKIHYVDLGDPI----LEGDDSANGEKA-------KSKH-FELS 409
Fly 410 KVERYLNGPVQNSMYDNHNDPMSLEEVQYKLVRNSESW---LNRN---------VQRTFICSKAA 462
Fly 463 VNALGELSPGGSMMRGFQEQSAG-QLVPNDFQRELRHLYLSLSELLKHFWSCFPP 516 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tfb1 | NP_001246321.1 | PH_TFIIH | 10..104 | CDD:270049 | 23/94 (24%) |
BSD | 104..157 | CDD:128990 | 17/68 (25%) | ||
BSD | 181..234 | CDD:281847 | 17/55 (31%) | ||
tfb1 | NP_594223.2 | PH_TFIIH | 10..95 | CDD:285736 | 22/86 (26%) |
BSD | 123..173 | CDD:281847 | 16/52 (31%) | ||
BSD | 190..245 | CDD:281847 | 17/56 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2074 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0004248 | |
OrthoInspector | 1 | 1.000 | - | - | oto100941 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103656 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12856 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1500 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.840 |