DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shrm and SHROOM3

DIOPT Version :10

Sequence 1:NP_001097307.1 Gene:Shrm / 36592 FlyBaseID:FBgn0085408 Length:1576 Species:Drosophila melanogaster
Sequence 2:NP_065910.3 Gene:SHROOM3 / 57619 HGNCID:30422 Length:1996 Species:Homo sapiens


Alignment Length:1755 Identity:369/1755 - (21%)
Similarity:581/1755 - (33%) Gaps:607/1755 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EMGESTKSLAKMEP------ENNNKISVVSVSKLLLKDSNGANSRSSNSNASFSSASVAGSVQDD 72
            :.||..:|....||      |::|    .::.:.|.::..| .|.|.|...:.|:.|...::.:.
Human   612 QAGEDKRSSRLSEPWEGDFQEDHN----ANLWRRLEREGLG-QSLSGNFGKTKSAFSSLQNIPES 671

  Fly    73 LPHHNSSSSQLGQQHG--SSLDQCGL-TQAGLEEYNNRSSSYYDQTAFHHQKQPSYAQSEGYHSY 134
            |..|:|.....|.|.|  .....|.: |:|  |:...:::   .....|..:|.||.:.||....
Human   672 LRRHSSLELGRGTQEGYPGGRPTCAVNTKA--EDPGRKAA---PDLGSHLDRQVSYPRPEGRTGA 731

  Fly   135 VSSSDSTSATPFLDKLRQESDLLSRQSHHWSENDLSSVCSNSVAPSPIPLLARQSHSHSHSHAH- 198
            .:|.:||..:|                              ...|:|       ||.|:.|... 
Human   732 SASFNSTDPSP------------------------------EEPPAP-------SHPHTSSLGRR 759

  Fly   199 -----SHSNSHGHSHGHAHSA----------SSSSSSNNNSNGSATNNN-NNNSSESTSSTETLK 247
                 |.|...|..:|..|.:          ....|...:..||...:| ..:.:.|||||    
Human   760 GPGPGSASALQGFQYGKPHCSVLEKVSKFEQREQGSQRPSVGGSGFGHNYRPHRTVSTSST---- 820

  Fly   248 WLGSMSDISEASHATGYSAISESVSSSQRIVHSSRVPTPKRHHSESVLYLHNNEEQGDSSPTASN 312
               |.:|..|......:|..:|.:.:.:            :|.....|.|    |:....|....
Human   821 ---SGNDFEETKAHIRFSESAEPLGNGE------------QHFKNGELKL----EEASRQPCGQQ 866

  Fly   313 SSQMMISEEANGEESPPSVQPLRIQHRHSPSYPPVHTSMVLHHFQQQQQQQQDYQHPSRHHTNQS 377
            .|. ..|:...|.:. |..:.||.|..                ||...:.:::.:...|..:.:|
Human   867 LSG-GASDSGRGPQR-PDARLLRSQST----------------FQLSSEPEREPEWRDRPGSPES 913

  Fly   378 TL-------STQSSLLELASPTEKPRSLMGQSHSMGDLQQKNPHQNPMLGRSAGQQHKSSISVTI 435
            .|       :.::|:.:..|     |.|...|....||:...|     :...:.:...||..|.:
Human   914 PLLDAPFSRAYRNSIKDAQS-----RVLGATSFRRRDLELGAP-----VASRSWRPRPSSAHVGL 968

  Fly   436 SSSEAVVTIAPQPPAGKPSKLQLSLGKSEALSCSTPNMGEQS-PTNSIDSYRSNHRLFPVS---T 496
            .|.||..:.:|..|..:.|              .||..|:.: |........:..||.|..   :
Human   969 RSPEASASASPHTPRERHS--------------VTPAEGDLARPVPPAARRGARRRLTPEQKKRS 1019

  Fly   497 YTEPVHSNTSQYVQHPKPQFSSGLHKSAKLPVITPAGATVQPTWHSVAERINDFERSQLGEPPKF 561
            |:||...|....|:..:|..........:.|.            .|||:|...|||..       
Human  1020 YSEPEKMNEVGIVEEAEPAPLGPQRNGMRFPE------------SSVADRRRLFERDG------- 1065

  Fly   562 AYLEPTKTHRLSNPALKALQKNAVQSYVERQQQQQK--------EEQQLLRPHSQSYQACHVERK 618
               :...|..||.|.||..|::|:..|::|:..::.        :|...||..:||..       
Human  1066 ---KACSTLSLSGPELKQFQQSALADYIQRKTGKRPTSAAGCSLQEPGPLRERAQSAY------- 1120

  Fly   619 SLPNNLSPIMVGLPTGSNSASTRDCSSPTPPP-PPRRSGSLLPNLLRRSSSA-----SDYAEFRE 677
                 |.|....| .||..||....||...|. .|||..:|||..:..:..|     |.:|..|.
Human  1121 -----LQPGPAAL-EGSGLASASSLSSLREPSLQPRREATLLPATVAETQQAPRDRSSSFAGGRR 1179

  Fly   678 LHQ---------AQGQVKG----------PSI------RNISNAEKISFNDCGMPPPPPPPRGRL 717
            |.:         |.|..:|          ||.      :::|..:.:..:|.            |
Human  1180 LGERRRGDLLSGANGGTRGTQRGDETPREPSSWGARAGKSMSAEDLLERSDV------------L 1232

  Fly   718 AVPTR---RTSSATEYAPMRDKLLLQQAAAL----------------------AHQQHHPQQHRH 757
            |.|..   |:|.||  |..|..:||.|.:..                      ..::..|..| |
Human  1233 AGPVHVRSRSSPAT--ADKRQDVLLGQDSGFGLVKDPCYLAGPGSRSLSCSERGQEEMLPLFH-H 1294

  Fly   758 AQP------------PHVPPERP----PKHPNLRVPSPELPPPPQSELDISYTFDEPLPPPPPPE 806
            ..|            ..||.|.|    .:....|.|.|. ||...::..::.|...||.|     
Human  1295 LTPRWGGSGCKAIGDSSVPSECPGTLDHQRQASRTPCPR-PPLAGTQGLVTDTRAAPLTP----- 1353

  Fly   807 VLQPRPPPSPNRRNCFAGASTRRTTYEAPPPTAIVAAKVPPLVPKKPTSLQHKHLANG------- 864
            :..|.|...|: ..|.....|.|                .||.|..|..:   |.:||       
Human  1354 IGTPLPSAIPS-GYCSQDGQTGR----------------QPLPPYTPAMM---HRSNGHTLTQPP 1398

  Fly   865 ------GGGSRKRPHHATPQPILENVASPVAPPPPLLPRARSTAHDNVIASNLESNQQKRSNSKA 923
                  |.|    |.|...:...:.|:.|..|||.....|.:...|::..   ||:....:|.| 
Human  1399 GPRGCEGDG----PEHGVEEGTRKRVSLPQWPPPSRAKWAHAAREDSLPE---ESSAPDFANLK- 1455

  Fly   924 SYLPRQSLEKLNNT-DPDHGIYKLTLTSNEDLVAHTKPSYGVTGKLPNNLPDVLPLGVKLHQQPK 987
            .|..:|||..|.:| |||                                   .||         
Human  1456 HYQKQQSLPSLCSTSDPD-----------------------------------TPL--------- 1476

  Fly   988 LQPGSPNGDANVTLRYGSNNNLTGNSPTV---APPPYYGGGQRYSTPVLGQGYGKSSKPVTPQQY 1049
               |:|:....::||.         |.:|   :|||:    :.|...|                :
Human  1477 ---GAPSTPGRISLRI---------SESVLRDSPPPH----EDYEDEV----------------F 1509

  Fly  1050 TRSQSYDVKHTSAVTMPTMSQSHVDLKQAAHDLETTLEEVLPTATPTPTPTPTPTPPRLS----- 1109
            .|.     .|..|.:.||.                   |.||   |.|.|.|:...|..|     
Human  1510 VRD-----PHPKATSSPTF-------------------EPLP---PPPPPPPSQETPVYSMDDFP 1547

  Fly  1110 PASSHSDCSLSTSSLECTINPIATPIPKPE------------------AHIFRAEVISTTLNTN- 1155
            |...|:.|.....|.:    |..   |:|.                  ||:..::.:::.|.|: 
Human  1548 PPPPHTVCEAQLDSED----PEG---PRPSFNKLSKVTIARERHMPGAAHVVGSQTLASRLQTSI 1605

  Fly  1156 ----PLTTPPKPAMNRQESLRENIEKITQLQSVLMSAHLCDASLLGGYTTPLITSPTASFANEPL 1216
                ..:|||.                      .||.|...|..|||...|:   .|.|.:::|:
Human  1606 KGSEAESTPPS----------------------FMSVHAQLAGSLGGQPAPI---QTQSLSHDPV 1645

  Fly  1217 MTPPLPPSPPPPLEPEEEEEQEENDVHDKQPEIEELQLMQRSELVLMVNPKPSTTDMACQTDELE 1281
                   |....||.:                               |:|.|..:.        |
Human  1646 -------SGTQGLEKK-------------------------------VSPDPQKSS--------E 1664

  Fly  1282 DRDTDLEAAREEHQTRTTLQPRQRQPIELDYEQMSRELVKLLPPGDKIADILTP-KICKPTSQYV 1345
            |..|:..|....||.::                              :||||.| ...|.|...:
Human  1665 DIRTEALAKEIVHQDKS------------------------------LADILDPDSRLKTTMDLM 1699

  Fly  1346 SNLYNPDVPLRLAKRDVGTSTLMRMKSITSSA-------EIRVVSVEL------QLAEPSEEPTN 1397
            ..|:..||.| |.:..|....:.|  :::||.       :...||:.:      .::.|..|..|
Human  1700 EGLFPRDVNL-LKENSVKRKAIQR--TVSSSGCEGKRNEDKEAVSMLVNCPAYYSVSAPKAELLN 1761

  Fly  1398 LIK----------------QKMDELIKHLNQKIVSLKREQQTISEECSANDRLGQDLFAKLAEKV 1446
            .||                :|..|||..|..|:.:|:..:.::..:...|:.||:::.|.::|..
Human  1762 KIKEMPAEVNEEEEQADVNEKKAELIGSLTHKLETLQEAKGSLLTDIKLNNALGEEVEALISELC 1826

  Fly  1447 RPSEASKFRTHVDAVGNITSLLLSLSERLAQTESSL-----ETRQQERGALESKRDLLYEQMEEA 1506
            :|:|..|:|..:..:..:.:||||||.|||:.|:.|     :...:||.:|..||.:|..|.|:|
Human  1827 KPNEFDKYRMFIGDLDKVVNLLLSLSGRLARVENVLSGLGEDASNEERSSLYEKRKILAGQHEDA 1891

  Fly  1507 QRLKSDIERRGVSIAGLLAKNLSADMCADYDYFINMKAKLIADARDLAVRIKGSEEQLSSLSDAL 1571
            :.||.:::||...:.|:||..||.:...||.:|:.||:.|:.:.|.|..:||..:||:..|.::|
Human  1892 RELKENLDRRERVVLGILANYLSEEQLQDYQHFVKMKSTLLIEQRKLDDKIKLGQEQVKCLLESL 1956

  Fly  1572  1571
            Human  1957  1956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShrmNP_001097307.1 ASD2 1318..1571 CDD:462561 81/287 (28%)
SHROOM3NP_065910.3 PDZ_shroom2_3_4-like 27..108 CDD:467232
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..173
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..389
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 437..468
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 568..629 5/16 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 673..772 27/140 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 788..1053 62/341 (18%)
ASD1 884..1066 CDD:462562 46/243 (19%)
PHA03247 <959..1521 CDD:223021 155/740 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1093..1115 3/21 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1137..1223 20/85 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1315..1573 82/401 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1627..1665 13/86 (15%)
ASD2 1670..1956 CDD:462561 84/318 (26%)
Blue background indicates that the domain is not in the aligned region.

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