DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shrm and SHROOM4

DIOPT Version :9

Sequence 1:NP_001097307.1 Gene:Shrm / 36592 FlyBaseID:FBgn0085408 Length:1576 Species:Drosophila melanogaster
Sequence 2:XP_016885171.1 Gene:SHROOM4 / 57477 HGNCID:29215 Length:1531 Species:Homo sapiens


Alignment Length:1633 Identity:347/1633 - (21%)
Similarity:536/1633 - (32%) Gaps:558/1633 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 STETLKWLGSMSDISEASHATGYS---AISESVSSSQR-IVHSSRVPTPKRHHSESVLYLHNNEE 302
            |||....:|||..:.:...||..|   .|.:::..:|| ..:||.  :...:.|:..|.|...|.
Human   149 STEKSSSIGSMESLEQPGQATYESHLLPIDQNMYPNQRDSAYSSF--SASSNASDCALSLRPEEP 211

  Fly   303 -------QGDSSPTASNSSQMMISEEANGEESPPSVQPLRIQHRH-SPSYPPVHTSMVLHHFQQQ 359
                   || ..||.:.|.:..::|.:.|..        |....| :||            .|..
Human   212 ASTDCIMQG-PGPTKAPSGRPNVAETSGGSR--------RTNGGHLTPS------------SQMS 255

  Fly   360 QQQQQDYQHPSRHHTNQSTLSTQSSLLELASPTEKPRSLMGQSHSMGDLQQKNPHQNPMLGRSA- 423
            .:.|:.||                     :.|.:..|               .|.|.|:...|. 
Human   256 SRPQEGYQ---------------------SGPAKAVR---------------GPPQPPVRRDSLQ 284

  Fly   424 --------GQQHKSSISVTISSSEAVVTIAPQPPAGKPSKLQLSLGKSEALSCSTPNMGEQSPTN 480
                    |:|.::|..|.....:..:::.|..||..|::.....|..:..|....|.....|..
Human   285 ASRAQLLNGEQRRASEPVVPLPQKEKLSLEPVLPARNPNRFCCLSGHDQVTSEGHQNCEFSQPPE 349

  Fly   481 SIDSYRSNHRLFPVSTYTEPVHSNTSQYVQHPKPQFSSGLHKSAKLPVITPAGATVQPTWHSVAE 545
            | ....|.|.|...||                         |:...|......::|..  :.:.|
Human   350 S-SQQGSEHLLMQAST-------------------------KAVGSPKACDRASSVDS--NPLNE 386

  Fly   546 RINDFERSQLGEPPKFAYLEPTKTHRLSNPALKALQKNAVQSYVERQQQQQKEEQQLLRPHSQSY 610
            ...:..::..|.||..  :.|| .||.|.|                        :|||..|.|  
Human   387 ASAELAKASFGRPPHL--IGPT-GHRHSAP------------------------EQLLASHLQ-- 422

  Fly   611 QACHVE---RKSLPNNLSPIMVG-------------------LPTG------SNSASTRDC---- 643
               ||.   |.|....|.|:..|                   .|||      |....||..    
Human   423 ---HVHLDTRGSKGMELPPVQDGHQWTLSPLHSSHKGKKSPCPPTGGTHDQSSKERKTRQVDDRS 484

  Fly   644 -----SSPTPPP------PPRRSGSLLPNLLRRSSSASDYAEFRELHQAQGQVKGPSIRNISNAE 697
                 .|.:.||      .|...|.|.||  |.|.:||:.|  .:...|.|.:...:....|..:
Human   485 LVLGHQSQSSPPHGEADGHPSEKGFLDPN--RTSRAASELA--NQQPSASGSLVQQATDCSSTTK 545

  Fly   698 KISFNDCGMPPPPPP-------------PRGRLAVPTRRTSS--ATEYAPMRDKLLLQQAAALAH 747
            ..|..:.|......|             .||| ::..||.|.  ||.   :|::  :|:..|...
Human   546 AASGTEAGEEGDSEPKECSRMGGRRSGGTRGR-SIQNRRKSERFATN---LRNE--IQRRKAQLQ 604

  Fly   748 QQHHP-QQHRHAQPPHVPPERPPKHPNLRVPSPEL------PPPPQSELDISYTFDEPLP-PPPP 804
            :...| .|....:.|....:.||:.|.|...:..|      ||.|:.:|     |::.:. ....
Human   605 KSKGPLSQLCDTKEPVEETQEPPESPPLTASNTSLLSSCKKPPSPRDKL-----FNKSMMLRARS 664

  Fly   805 PEVLQPRPPP-----------SPNRRNCFAGAST--RRTTYEAPPPTAIVAAKVPPLVPKKPTSL 856
            .|.|...|..           ||.:|   .|.|:  ..|.::||.|::....|.           
Human   665 SECLSQAPESHESRTGLEGRISPGQR---PGQSSLGLNTWWKAPDPSSSDPEKA----------- 715

  Fly   857 QHKHLANGGGGSRKRPHHATPQPILENVASPVAPPPPLLPRARSTAHDN--VIASNLESNQQKRS 919
             |.|....||..|..|.| ..||:   ||:.:..|        |...||  :.||..::.:.   
Human   716 -HAHCGVRGGHWRWSPEH-NSQPL---VAAAMEGP--------SNPGDNKELKASTAQAGED--- 764

  Fly   920 NSKASYLP----RQSLEKLNNTDPDHGIYKLTLTSNEDLVAHTKPSYGVTGKLPNNLPDVLPLGV 980
               |..||    |:..|:.:.:.....:..||..||:......||       :..|...:.....
Human   765 ---AILLPFADRRKFFEESSKSLSTSHLPGLTTHSNKTFTQRPKP-------IDQNFQPMSSSCR 819

  Fly   981 KLHQQPKLQPGSPNGDANVTLRYGSNNNLTGNSPTVAPPPYYGGGQRY--------STPVLGQGY 1037
            :|.:.|..|            .|.|           |..||:...|.|        .||...:.:
Human   820 ELRRHPMDQ------------SYHS-----------ADQPYHATDQSYHSMSPLQSETPTYSECF 861

  Fly  1038 GKSS-------KPV--TPQQYTRSQSYDVKHTSAVT--------------------MPTM----- 1068
            ....       ||:  ....|.|:.||......|:.                    ||..     
Human   862 ASKGLENSMCCKPLHCGDFDYHRTCSYSCSVQGALVHDPCIYCSGEICPALLKRNMMPNCYNCRC 926

  Fly  1069 -------------SQSHVDLKQAA-------HDLETTLEE----------------------VLP 1091
                         :..|..|:.::       ...:.|::|                      :.|
Human   927 HHHQCIRCSVCYHNPQHSALEDSSLAPGNTWKPRKLTVQEFPGDKWNPITGNRKTSQSGSEALKP 991

  Fly  1092 TATP-----TPTPTPTPTPP---RLS--------PASSHSDCSLSTSSLECTINPIATPIPKPEA 1140
            :.||     |.|...||..|   |||        .|.|.:..|.:|....|..|| |..:....|
Human   992 SWTPEDECSTSTFCCTPGVPASLRLSLRDRQGREMAHSKTSFSWATPFHPCLENP-ALDLSSYRA 1055

  Fly  1141 -----------H-IFRAEVISTTLNTNPLTTPPKPAMNRQ-----------------ESLRENIE 1176
                       | :.::|..|.....:.|.:.|.|..:|.                 :..||...
Human  1056 ISSLDLLGDFKHALKKSEETSVYEEGSSLASMPHPLRSRAFSESHISLAPQSTRAWGQHRRELFS 1120

  Fly  1177 KITQLQSVLMSAHLCDASLLGGYTTPLITSPTASFANEPLMTPPLPPSPPPP------------- 1228
            |..:.||.|:.|.                  ..:|.         ||.||||             
Human  1121 KGDETQSDLLGAR------------------KKAFP---------PPRPPPPNWEKYRLFRAAQQ 1158

  Fly  1229 -----------LEPEEEEEQEENDVHDKQPEIEELQLMQRSELVLMVNPKPSTTDMACQTDELED 1282
                       .|.|||||:||.:..:::.|.||    :..||........::...|...:|:.:
Human  1159 QKQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEE----EEEELPPQYFSSETSGSCALNPEEVLE 1219

  Fly  1283 RDT-----DLEAAREEHQT-------------------RTTL--QPRQRQPI------------- 1308
            :..     .||.:|:..|:                   |..|  ||.|.||.             
Human  1220 QPQPLSFGHLEGSRQGSQSVPAEQESFALHSSDFLPPIRGHLGSQPEQAQPPCYYGIGGLWRTSG 1284

  Fly  1309 ELDYEQMSRELVKLLPPGDKIADILTPKICKPTSQYVSNLYNPDVPLRLAKRDVGTSTLMRMKSI 1373
            :...|...:|.....||..      .|.|  |||  .|..||    :.:||.::    |.::|..
Human  1285 QEATESAKQEFQHFSPPSG------APGI--PTS--YSAYYN----ISVAKAEL----LNKLKDQ 1331

  Fly  1374 TSSAEIRVVSVELQLAEPSEEPTNLIKQKMDELIKHLNQKIVSLKREQQTISEECSANDRLGQDL 1438
            ...|||       .|.|  ||..:.:.||..:||:.:::|:..|:..|:.:.|:.:||..||:::
Human  1332 PEMAEI-------GLGE--EEVDHELAQKKIQLIESISRKLSVLREAQRGLLEDINANSALGEEV 1387

  Fly  1439 FAKLAEKVRPSEASKFRTHVDAVGNITSLLLSLSERLAQTESSLET----RQQERGALESKRDLL 1499
            .|.|....:.:|..|:...|..:..:.:||||||.|||:.|::|.:    ..||:..|..|:..|
Human  1388 EANLKAVCKSNEFEKYHLFVGDLDKVVNLLLSLSGRLARVENALNSIDSEANQEKLVLIEKKQQL 1452

  Fly  1500 YEQMEEAQRLKSDIERRGVSIAGLLAKNLSADMCADYDYFINMKAKLIADARDLAVRIKGSEEQL 1564
            ..|:.:|:.||..::||...:.|::::.|..|...||.:|:.||:.||.:.|:|..:||..||||
Human  1453 TGQLADAKELKEHVDRREKLVFGMVSRYLPQDQLQDYQHFVKMKSALIIEQRELEEKIKLGEEQL 1517

  Fly  1565 SSLSDALV 1572
            ..|.::|:
Human  1518 KCLRESLL 1525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShrmNP_001097307.1 ASD2 1318..1570 CDD:285850 80/255 (31%)
SHROOM4XP_016885171.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157083
Domainoid 1 1.000 110 1.000 Domainoid score I6298
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41129
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15012
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
44.030

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