Sequence 1: | NP_001097307.1 | Gene: | Shrm / 36592 | FlyBaseID: | FBgn0085408 | Length: | 1576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002935306.3 | Gene: | shroom1 / 100145627 | XenbaseID: | XB-GENE-6492080 | Length: | 1432 | Species: | Xenopus tropicalis |
Alignment Length: | 1763 | Identity: | 346/1763 - (19%) |
---|---|---|---|
Similarity: | 585/1763 - (33%) | Gaps: | 540/1763 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 NHKENGNGSEMGESTKSLAKMEPENNNKISVVSVSKLLLKDSNGANSRSSNSNASFSSASVAGSV 69
Fly 70 QDDLPHHNSSSSQLGQQHGSSLDQCGLTQAGLEEYNNRSSSYYDQTAFHHQKQPSYAQSEG-YHS 133
Fly 134 YVSSSDSTSATPFLDKLRQESDLLSRQSHHWSENDLSSVCSNSVAPSPIPLLARQSHSHSHSHAH 198
Fly 199 SH---------SNSHGHSHGHAHSASSSSS---SNNNSNGSATNNNNNNSSESTSSTETLKWLGS 251
Fly 252 MSDISEASHATGYSAISESVSSSQRIVHSSRVPTPKRHHSESVLYLHNNEEQGDSSPTASNSSQM 316
Fly 317 MISEEANGEESPPSVQPLRIQHRHSPSYPPVHTSMVLHHFQQ-QQQQQQDYQHPSRHHTNQSTLS 380
Fly 381 -------TQSSLLELASPTEKPRS-LMGQSHSMGDLQQKNPHQNPMLGRSAGQQHKSSISVTISS 437
Fly 438 SEAVVTIAPQPPAGKPSKLQLSLGKSEALSCSTPNMGEQSPTNSIDSYR---------------- 486
Fly 487 -------SNH------RLFPVSTYT-EPVHSNTSQYVQHPKPQFSSGLHKSAKLPV--ITPAGAT 535
Fly 536 VQPTWHSVAERINDFERSQLGEP-------PKFAYL----------EPTKTHRLSNPALKALQKN 583
Fly 584 AVQSYVERQQQQQKEEQQLLRPHSQSYQACHVERKSLPNNLSPIMVGLPTGSNSASTRDCSSPTP 648
Fly 649 PPPPR----RSGSLLPNLLRRSSSASDYAEFRELHQAQGQVKGPSIRNISNAEKISFNDCGMPPP 709
Fly 710 PPPPRGRLAVPTRRTSSATEYAPMRDKLLLQQAAALAHQQHHPQQHRHAQPPHVPPERPPKHPNL 774
Fly 775 RVPSPELPPPPQSELDISYTFDEPLPPPPPPEVLQPRPPPSPNRRNCFAGASTRRTTYEAPPPTA 839
Fly 840 IVAAKVPPLVPKKPTSLQHKHLANGGGGSRKRPHHATPQPILENVASPVAPPPPLLPRARSTAHD 904
Fly 905 NVIASNLESNQQKRSNSKASYLPRQSLEKLNNTDPDHGIYKLTLTSNEDLVAHTKPSYGVTGKLP 969
Fly 970 NNLPDVLPLGVKLHQQPKLQPGSPNGDANVTLRY--------GSNNNLTGNSPTVAPPPYYGGGQ 1026
Fly 1027 RYSTPVLGQGYGKSS---------KPVTPQQYTRSQSYDVK------HTSAVTMPTMSQSH---- 1072
Fly 1073 ---------VDLKQAAHDLETTLEEVLPTATPTPTPTPTPTPPRLSPASSHSDCSLS-----TSS 1123
Fly 1124 L------ECTINPIATPIPK--PEAHIF--RAEVISTTLNTNPLTTPPKP-----AMNRQESLRE 1173
Fly 1174 NIEKITQLQ-------SVLMSAHLCDA--------------SLL--GGYTTPLITSPTA--SFAN 1213
Fly 1214 EPLM-------TPPLPPSPPPPLEPE----EEEEQEENDVHDKQPEIE---------ELQLMQRS 1258
Fly 1259 ELVLMVNPKPSTTD--MACQTDELEDRDTDLEAAREEHQTRTTLQPRQRQPIELDYEQMSRELVK 1321
Fly 1322 LLPPGDK-IADILTP-KICKPTSQYVSNLYNPDVPLRLAKRDVG------TSTLMRMKS-ITSSA 1377
Fly 1378 EI-RVVSVELQLA---EPSEEPTNLIKQKMDELIKHLNQKIVSLKREQQTISEECSANDRLGQDL 1438
Fly 1439 FAKLAEKVRPSEASKFRTHVDAVGNITSLLLSLSERLAQTESSL-----ETRQQERGALESKRDL 1498
Fly 1499 LYEQMEEAQRLKSDIERRGVSIAGLLAKNLSADMCADYDYFINMKAKLIADARDLAVRIKGSEEQ 1563
Fly 1564 LSSLSDAL 1571 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Shrm | NP_001097307.1 | ASD2 | 1318..1570 | CDD:285850 | 74/269 (28%) |
shroom1 | XP_002935306.3 | ASD1 | 481..644 | CDD:400846 | 48/242 (20%) |
ASD2 | 1159..1429 | CDD:400845 | 74/269 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 117 | 1.000 | Domainoid score | I5831 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0004714 | |
OrthoInspector | 1 | 1.000 | - | - | otm48335 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15012 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.100 |