DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and CNGC8

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_173408.2 Gene:CNGC8 / 838566 AraportID:AT1G19780 Length:753 Species:Arabidopsis thaliana


Alignment Length:835 Identity:168/835 - (20%)
Similarity:309/835 - (37%) Gaps:227/835 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   620 LSGDSEESVRCSYCSVLNVNDNDLRISFENTCTD----SLVTAFDDEALLICDQGTEMVHFDDVS 680
            :||..|:.||        ::|.|.|:|..:..|.    |....|                  :|:
plant     7 ISGHREKFVR--------LDDTDSRVSMSSNATGMKKRSCFGLF------------------NVT 45

  Fly   681 LYGTPKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVKERIRQKTSGHWV 745
            ..|..|.:..........|:.:..||:..:|:..           |..:|:..|.:|  .|...:
plant    46 SRGGGKTKNTSKSFREGVKIGSEGLKTIGKSFTS-----------GVTRAVFPEDLR--VSEKKI 97

  Fly   746 IHPCSSFRFYWD-----LCMLLLLVANLII-LPVAISFFN-----DDLSTRWIAFNCLSDTIFLI 799
            ..|.......|:     .|:|.:.|..|.. ||:..:..|     ..|:........:.|..:|.
plant    98 FDPQDKTLLLWNRMFVISCILAVSVDPLFFYLPIVDNSKNCIGIDSKLAVTTTTLRTIIDVFYLT 162

  Fly   800 DIVVNFRTGIMQQDN----AEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDF 860
            .:.:.|||..:...:    ..::::||..||:.||..:|.:|.::.:||..|.:           
plant   163 RMALQFRTAYIAPSSRVFGRGELVIDPAKIAERYLTRYFIVDFLAVLPLPQIAV----------- 216

  Fly   861 SDSFQILHAGRALRILRLAK-LLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKD 924
               ::.||..:...:|...: ||.:|....:.|.||::....|:       ||:|   |......
plant   217 ---WKFLHGSKGTDVLPTKQALLHIVITQYIPRFVRFIPLTSEL-------KKTA---GAFAEGA 268

  Fly   925 KDG--------LTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSG---------CLQFL----- 967
            ..|        :..|::...|..|.||..   |..|:.      |.         |:|.|     
plant   269 WAGAAYYLLWYMLASHITGAFWYMLSVER---NDTCLR------SACKVQPDPKVCVQILYCGSK 324

  Fly   968 ------------VPMLQGFPSNSWVSINELQESY----------------WLEQYSWALFKAMSH 1004
                        ||.|  |.:|.....:|.:.:|                :..::.:.|:..:.:
plant   325 LMSSRETDWIKSVPDL--FKNNCSAKSDESKFNYGIYSQAVSSGIVSSTTFFSKFCYCLWWGLQN 387

  Fly  1005 MLCIGYG----RFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEE 1065
            :..:|.|    .:|.:.|    .::...::|...:||.:|:....:|||.....:.|.|.:..|:
plant   388 LSTLGQGLQTSTYPGEVL----FSIAIAVAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQ 448

  Fly  1066 YMAYRKLPRDMRQRITEYFEHRY-QGKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANAD 1129
            :|.:|.||:::|:|:..|.:::: :.:..|||.|:..|.:.||.|:..:.|.:||..||.|||.|
plant   449 WMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMD 513

  Fly  1130 SNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVA-----TSLSDGSYFG 1189
            ...:..:..:||..::.....|::||....:|.||..|.::.|..:|..:     ..|.:|.:.|
plant   514 ERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCG 578

  Fly  1190 EICL-----------LTNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLM--RKTMETV----- 1236
            |..|           |.::.|  :|:|.|....|:|..:....|..|:..:  |:..:|.     
plant   579 EELLTWALDPKAGSNLPSSTR--TVKALTEVEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQ 641

  Fly  1237 -----------AAERLNKIGKNPNIMHQKDEQLSNPESNTITAVVNALAAEADDCKDDDMD---- 1286
                       ||.|.:...|...:..:::|:             ..:..|.|:..||:|.    
plant   642 QWRTWAACFIQAAWRRHLRRKIAELRRKEEEE-------------EEMDYEDDEYYDDNMGGMVT 693

  Fly  1287 --------------------LKENLLHGSESSIAEPVQTIREGLPRPRSGEFRAL 1321
                                ...|.|.|.:..:.|..:::. .|.:|...:|.||
plant   694 RSDSSVGSSSTLRSTVFASRFAANALKGHKLRVTESSKSLM-NLTKPSEPDFEAL 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 7/41 (17%)
PLN03192 741..>1214 CDD:215625 121/559 (22%)
CNGC8NP_173408.2 PLN03192 155..>579 CDD:215625 101/462 (22%)
CAP_ED 508..639 CDD:237999 31/132 (23%)

Return to query results.
Submit another query.