DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and CNGC7

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001319014.1 Gene:CNGC7 / 838169 AraportID:AT1G15990 Length:738 Species:Arabidopsis thaliana


Alignment Length:790 Identity:169/790 - (21%)
Similarity:295/790 - (37%) Gaps:218/790 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   666 ICDQGTEMVHFDDVSLYGTPKEEPM----------PNIPIVSEKVSANFL--------------- 705
            |..|..:.|..||:....:|....|          .|.....:|.|.:|.               
plant     7 ISGQREKFVRLDDIDSSSSPATGMMMQRNCFGFNLKNRGGEKKKASKSFREGVKKIRSEGLITIG 71

  Fly   706 KSQLQSWFQPTDNRLA-MKLFGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLI 769
            ||..::.| |.|.|:. .|:|..         :.||...|       .|.:...|:|.:.|..|.
plant    72 KSVTRAVF-PEDLRITEKKIFDP---------QDKTLLVW-------NRLFVISCILAVSVDPLF 119

  Fly   770 I-LPVAISF------FNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDN----AEQVILDPK 823
            . ||:..:.      .:..|:........:.|..:|..:.:.|||..:...:    ..::::||.
plant   120 FYLPIVDNSGSSCIGIDTKLAVTTTTLRTIVDVFYLTRMALQFRTAYIAPSSRVFGRGELVIDPA 184

  Fly   824 LIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRIL-RLAKLLSLVRL 887
            .||:.||..:|.:|.::.:||..|.:              ::.||..:...:| ....||::|.:
plant   185 KIAERYLTRYFVVDFLAVLPLPQIAV--------------WKFLHGSKGSDVLPTKTALLNIVIV 235

  Fly   888 LRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDG--------LTKSNLILKFLNMASVF 944
            ..:.|.||::....|:       ||:|   |........|        :..|::...|..|.||.
plant   236 QYIPRFVRFIPLTSEL-------KKTA---GAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSVE 290

  Fly   945 MRIFNLICMMLLIGHWSG----------CLQFL-----------------VPMLQGFPSNSWVSI 982
            .   |..|       |..          |:|.|                 ||.|  ..||.....
plant   291 R---NDTC-------WRFACKVQPDPRLCVQILYCGTKFVSSGETEWIKTVPEL--LKSNCSAKA 343

  Fly   983 NELQESY----------------WLEQYSWALFKAMSHMLCIGYG----RFPPQSLTDMWLTMLS 1027
            ::.:.:|                :..::.:.|:..:.::..:|.|    .||.:.|    .::..
plant   344 DDSKFNYGIYGQAISSGIVSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTFPGEVL----FSIAI 404

  Fly  1028 MISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY-QGK 1091
            .|:|...:||.:|:....:|||.....:.|.|.:..|::|.:|.||:::|:|:..|.:::: :.:
plant   405 AIAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETR 469

  Fly  1092 FFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGT 1156
            ..|||.|:..|.:.||.|:..:.|.:||..||.|||.|...:..:..:||..:|.....|::||.
plant   470 GVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGD 534

  Fly  1157 IGTKMYFIQEGVVDIVMANGEVA-----TSLSDGSYFGEICL-----------LTNARRVASVRA 1205
            ...:|.||..|.::.|..:|..:     ..|.:|.:.||..|           |.::.|  :|:|
plant   535 PVNEMMFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTR--TVKA 597

  Fly  1206 ETYCNLFSLSVDHFNCVLDQYPLM--RKTMETV----------------AAERLNKIGKNPNI-- 1250
            .|....|:|..:....|..|:..:  |:..:|.                ||.|.....||..:  
plant   598 LTEVEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRKNAELRR 662

  Fly  1251 MHQKDEQLSNPESNTITAVVNALAAEADDCKDDDMDLKENLLHGSESSIAEPVQTIREGLPRPRS 1315
            :.:|:|:|.                 .:|..||:.|.:..::..||||            .|.||
plant   663 IEEKEEELG-----------------YEDEYDDESDKRPMVITRSESS------------SRLRS 698

  Fly  1316 GEFRALFEGN 1325
            ..|.:.|..|
plant   699 TIFASRFAAN 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 9/42 (21%)
PLN03192 741..>1214 CDD:215625 121/556 (22%)
CNGC7NP_001319014.1 PLN03192 149..>573 CDD:215625 103/463 (22%)
CAP_ED 502..633 CDD:237999 32/132 (24%)

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