DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and CNGC5

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_200602.2 Gene:CNGC5 / 835905 AraportID:AT5G57940 Length:717 Species:Arabidopsis thaliana


Alignment Length:603 Identity:127/603 - (21%)
Similarity:228/603 - (37%) Gaps:159/603 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   725 FGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFF----------- 778
            ||..:|:..|.:  |.|...:..|...|..|.:    .|.||:.|:......||           
plant    70 FGVYRAVFPEDL--KVSEKKIFDPQDKFLLYCN----KLFVASCILSVFVDPFFFYLPVINAESK 128

  Fly   779 ----NDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDN----AEQVILDPKLIAKHYLRTWFF 835
                :..|:..........|..:|..:.:..||..:...:    ..::::||..|||.||:.||.
plant   129 CLGIDRKLAITASTLRTFIDVFYLAHMALQLRTAYIAPSSRVFGRGELVIDPAQIAKRYLQRWFI 193

  Fly   836 LDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRAL----------RILRLAKLLS------- 883
            :|.:|.:||..|.     :.:....|:...:|...:||          |.||:..|.|       
plant   194 IDFLSVLPLPQIV-----VWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAG 253

  Fly   884 --------------LVRLLR---------LSRLVRYVSQWEEV---------------------Y 904
                          |:.:|.         |..|.|..:.|:|.                     |
plant   254 VFAETAWAGAAYYLLLYMLASHIVGAFWYLLALERNDACWQEACIDAGNCSTDFLYCGNQNMDGY 318

  Fly   905 ILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVP 969
            .:.|..|:|.     :..|.:..|..:|....|                    |.::..|...:.
plant   319 AVWNRAKESV-----LKSKCRADLDDNNPPFDF--------------------GIYTQALSSGIV 358

  Fly   970 MLQGFPSNSWVSINELQESYWLEQYSWALFKAMSHMLCIGYG----RFPPQSLTDMWLTMLSMIS 1030
            ..|.|                :.:|.:.|:..:.::..:|.|    .:|.:.:..:.|.    ||
plant   359 SSQNF----------------IVKYCYCLWWGLQNLSTLGQGLETSTYPMEIIFSISLA----IS 403

  Fly  1031 GATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY-QGKFFD 1094
            |...:||.:|:....:|||.....:.|.|.:..|::|.:|.||:|:|:|:..|.:::: :.:..|
plant   404 GLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVD 468

  Fly  1095 EELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGT 1159
            ||.::..|.:.||.|:..:.|.:||..||.|.:.|...:..:..:||..:|.....:::||....
plant   469 EEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVD 533

  Fly  1160 KMYFIQEGVVDIVMANGEVA-----TSLSDGSYFGEICL-----------LTNARRVASVRAETY 1208
            :|.||..|.::.|..:|..:     :.|.:|.:.||..|           |.::.|  :|:|.|.
plant   534 EMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTR--TVKALTE 596

  Fly  1209 CNLFSLSVDHFNCVLDQY 1226
            ...|:|:.:....|..|:
plant   597 VEAFALTSEELKFVASQF 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 7/25 (28%)
PLN03192 741..>1214 CDD:215625 119/573 (21%)
CNGC5NP_200602.2 PLN03192 84..>550 CDD:215625 107/519 (21%)
CAP_ED 498..629 CDD:237999 27/119 (23%)

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