DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and DND1

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_197045.1 Gene:DND1 / 831393 AraportID:AT5G15410 Length:726 Species:Arabidopsis thaliana


Alignment Length:731 Identity:146/731 - (19%)
Similarity:263/731 - (35%) Gaps:208/731 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   616 GDRLLSGDSE----ESVRCSYCSVLNVNDNDLRISFENTCTDSLVTAFDDEALLICDQ------- 669
            ||...||..|    .||.|..|:.:.|.      :|.:|.               |||       
plant    37 GDSSSSGSDETPVLSSVECYACTQVGVP------AFHSTS---------------CDQAHAPEWR 80

  Fly   670 ---GTEMVHFDDVSLYGTPKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKAL 731
               |:.:|..         :|..:||                      |...|..          
plant    81 ASAGSSLVPI---------QEGSVPN----------------------PARTRFR---------- 104

  Fly   732 VKERIRQKTSGHWVIHPCSSFRFYWDLCMLL-----LLVANLIILPVAIS-------FFNDDLST 784
                 |.|.....|:.|.|.....|:..:||     |.|..|....::|.       .:.|....
plant   105 -----RLKGPFGEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFA 164

  Fly   785 RWIAF--NCLSDTIFLIDIVVNFRTGIMQQDN----AEQVILDPKLIAKHYLRT----WFFLDLI 839
            ..:..  .|| |.:.|..:.:.||...:.:::    ..:::.||:.||.||.|:    ||.:.:|
plant   165 AVVTVLRTCL-DAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYARSLTGFWFDVIVI 228

  Fly   840 SSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQ-WEEV 903
            ..:|....:|:                     ..:::|..|:..::.:|.|..|.:::.: :..:
plant   229 LPVPQAVFWLV---------------------VPKLIREEKVKLIMTILLLIFLFQFLPKIYHCI 272

  Fly   904 YILQNLQKKSADRRGRMNRKDKDGLTKSNLILKF-LNMASVFM---------------RIFNLI- 951
            .:::.:||.:             |.....:...| ||:.:.|:               |:.:.| 
plant   273 CLMRRMQKVT-------------GYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIR 324

  Fly   952 --------CMMLLIGHWSGCLQFLVP-MLQGFPSNSWVSINELQESYWLEQ--------YSWALF 999
                    |.:.|......|.||:.| ...|:|..|....:.:.:...|:.        |.|||.
plant   325 QQCMRTGNCNLSLACKEEVCYQFVSPTSTVGYPCLSGNLTSVVNKPMCLDSNGPFRYGIYRWALP 389

  Fly  1000 KAMSHMLCIG--YGRF--------------PPQSLTDMWLTMLSMISGATCYALFLGHATNLIQS 1048
            ...|:.|.:.  |..|              |..:..::..:::.::||...:.|.:|:....:.:
plant   390 VISSNSLAVKILYPIFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHA 454

  Fly  1049 LDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQGKFFDEEL-ILGELSEKLREDVIN 1112
            :.:.:|:.:.:.:.:|.:|..|:||..:|||:..:...|:.....::|| ::.:|...||.|:..
plant   455 VMAKKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDIKR 519

  Fly  1113 YNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIV--MAN 1175
            |.|..|:..||.|...|...:.::..:.|..||...:.||:||....:|.||..|.|..:  ::.
plant   520 YLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVKRIQSLSK 584

  Fly  1176 GEVATS-LSDGSYFGEICLLTNAR-----RVASVRAETYC----NLFSLSVDHFNCVLDQYPLMR 1230
            |.:||| |..|.|.|:..|....|     |:....|...|    ..|||..:....:.|.:    
plant   585 GVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSEDLRYITDHF---- 645

  Fly  1231 KTMETVAAERLNKIGK 1246
              ....|.|||.:..:
plant   646 --RYKFANERLKRTAR 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 6/41 (15%)
Ion_trans 771..1054 CDD:278921 57/350 (16%)
Crp 1118..>1241 CDD:223736 36/134 (27%)
CAP_ED 1124..1233 CDD:237999 31/120 (26%)
DND1NP_197045.1 PLN03192 <388..>600 CDD:215625 52/211 (25%)
CAP_ED 531..641 CDD:237999 30/109 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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