DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and CNGC13

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001319839.1 Gene:CNGC13 / 826427 AraportID:AT4G01010 Length:696 Species:Arabidopsis thaliana


Alignment Length:649 Identity:144/649 - (22%)
Similarity:249/649 - (38%) Gaps:166/649 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   669 QGTEMVHFDDVSLYGTPKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVK 733
            :|||         ||..:.:..|::..|.:.|... ||..|.              |||..   |
plant    17 EGTE---------YGYGRNKARPSLNTVLKNVRRG-LKKPLS--------------FGSHN---K 54

  Fly   734 ERIRQK--TSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFF--------------NDDL 782
            :|....  |:...:|:|..||...|:   .:.|.|::|.|.:...||              :.:|
plant    55 KRDSNSSTTTQKNIINPQGSFLQNWN---KIFLFASVIALAIDPLFFYIPIVDGERHCLNLHRNL 116

  Fly   783 STRWIAFNCLSDTIFLIDIVVNFRTGIMQQDN----AEQVILDPKLIAKHYLRTWFFLDLISSIP 843
            ...........|..::|.||..|||..:...:    ..:::.|||.||..||.::|.:||:|.:|
plant   117 EIAASVLRTFIDAFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSSYFIIDLLSILP 181

  Fly   844 L---------------------DY-IFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVR 886
            |                     || |.:||.|.:.                 ||||:..|.:  .
plant   182 LPQLVVLAVIPNVNKPVSLITKDYLITVIFTQYIP-----------------RILRIYPLYT--E 227

  Fly   887 LLRLSRLVRYV----SQWE-EVYILQN------LQKKSADRRGRMNRK--DK------------D 926
            :.|.|.:|...    :.|. .:|:|.:      ....|.:|..|..|:  :|            |
plant   228 VTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCD 292

  Fly   927 GLTKSNLILKFLNMASVFMR--------IFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSIN 983
            |  .|::...||..:..|:.        :||       .|.::..|:      .|...:      
plant   293 G--NSSVRNDFLTTSCPFINPDDITNSTVFN-------FGIFTDALK------SGIVES------ 336

  Fly   984 ELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQS 1048
               :.:| :::.:..:..:.::..:|......:.:.::...:...|||...:||.:|:....::|
plant   337 ---DDFW-KKFFYCFWWGLRNLSALGQNLNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLES 397

  Fly  1049 LDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQ-GKFFDEELILGELSEKLREDVIN 1112
            ......:.|.:.:..|::|::|.||.|:|:||..|.::::| .:..:||.:|..|.:.||.|:..
plant   398 TTVREEEMRVRKRDAEQWMSHRMLPDDLRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKR 462

  Fly  1113 YNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGE 1177
            :.|..|:..||.|...|...:..|..|||..::......|:||....:|.|:..|.:.....||.
plant   463 HFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGG 527

  Fly  1178 -----VATSLSDGSYFGEICLLTNAR----------RVASVRAETYCNLFSLSVDHFNCVLDQY 1226
                 .|..|....:.|| .|||.|.          ...:|:|.|....|:|:.|....|..|:
plant   528 RTGFFNAVYLKPSDFCGE-DLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQF 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 9/43 (21%)
Ion_trans 771..1054 CDD:278921 66/355 (19%)
Crp 1118..>1241 CDD:223736 33/124 (27%)
CAP_ED 1124..1233 CDD:237999 30/118 (25%)
CNGC13NP_001319839.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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