DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and CNGC19

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_188396.2 Gene:CNGC19 / 821036 AraportID:AT3G17690 Length:729 Species:Arabidopsis thaliana


Alignment Length:713 Identity:157/713 - (22%)
Similarity:272/713 - (38%) Gaps:199/713 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   684 TPKEEP----MPNIPIVSEKV--SANFLKS-QL-----------QSWFQPTDNRLAMKLFGSRKA 730
            :|:|.|    ..::|...:.|  :||.|:| ||           .|::    ||.|.:|..||.:
plant    68 SPQESPDSSSTVDVPPEDDFVFKNANLLRSGQLGMCNDPYCTTCPSYY----NRQAAQLHTSRVS 128

  Fly   731 LVKER-----------------IRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFF 778
            ..:.|                 :|:...|  :::|.|.|...|...:....:..:.|.|  :.||
plant   129 ASRFRTVLYGDARGWAKRFASSVRRCLPG--IMNPHSKFVQVWTRVLAFSSLVAIFIDP--LFFF 189

  Fly   779 -------NDDLSTRW------IAFNCLSDTIFLIDIVVNFRTGIMQQDN----AEQVILDPKLIA 826
                   |..::..|      ::...::|.||.|:|::.||...:..::    |.|::..|:.||
plant   190 LLLIQQDNKCIAIDWRATKVLVSLRSITDLIFFINILLQFRLAYVAPESRIVGAGQLVDHPRKIA 254

  Fly   827 KHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAG-----RALRILRLAKLLSLV- 885
            :||.|..|.||:....|:.       |||.|:...     ||.|     ...:|||...|...: 
plant   255 RHYFRGKFLLDMFIVFPIP-------QIMILRIIP-----LHLGTRREESEKQILRATVLFQYIP 307

  Fly   886 RLLRLSRLVR--------YVSQWEEVYI--------------------LQNLQK-------KSAD 915
            :|.||..|:.        :.|.|....|                    ||.::|       .|||
plant   308 KLYRLLPLLAGQTSTGFIFESAWANFVINLLTFMLAGHAVGSCWYLSALQRVKKCMLNAWNISAD 372

  Fly   916 R--------RGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQ 972
            .        ||....|.:..|.:.|        |||                 :.|.|     ..
plant   373 ERRNLIDCARGSYASKSQRDLWRDN--------ASV-----------------NACFQ-----EN 407

  Fly   973 GFPSNSWV-SINELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYA 1036
            |:....:: ::|...||.:..::|::|:.....:..:.....|..|:.:::.||..:..|...:|
plant   408 GYTYGIYLKAVNLTNESSFFTRFSYSLYWGFQQISTLAGNLSPSYSVGEVFFTMGIIGLGLLLFA 472

  Fly  1037 LFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQG-KFFDEELILG 1100
            ..:|:..|.:||||..|.:...:.:.||::|::|:||.|:|:|:.|...:.:.. :..:|||:..
plant   473 RLIGNMHNFLQSLDRRRMEMMLRKRDVEQWMSHRRLPEDIRKRVREVERYTWAATRGVNEELLFE 537

  Fly  1101 ELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQ 1165
            .:.:.|:.|:..:..:.| ..|..|:..|.:.:..:..:||...:.....::....:..||.||.
plant   538 NMPDDLQRDIRRHLFKFL-KKVRIFSLMDESVLDSIRERLKQRTYIRSSTVLHHRGLVEKMVFIV 601

  Fly  1166 EGVVDIVMANGEVATSLSDGSYFGE----ICLLT---NARRV----------ASVRAETYCNLFS 1213
            .|.::.:..:|.| ..||:|...||    .||.:   :..|:          .:||..|....||
plant   602 RGEMESIGEDGSV-LPLSEGDVCGEELLTWCLSSINPDGTRIKMPPKGLVSNRNVRCVTNVEAFS 665

  Fly  1214 LSVDHFNCVL-------------------DQYPLMRKTMETVAA--------ERLNKIGKNPN 1249
            |||.....|.                   ..|..:|..|:...|        :|||....|.|
plant   666 LSVADLEDVTSLFSRFLRSHRVQGAIRYESPYWRLRAAMQIQVAWRYRKRQLQRLNTAHSNSN 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 12/69 (17%)
PLN03192 741..>1214 CDD:215625 123/557 (22%)
CNGC19NP_188396.2 PLN03192 216..>625 CDD:215625 103/452 (23%)

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