DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and KCNH6

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_110406.1 Gene:KCNH6 / 81033 HGNCID:18862 Length:994 Species:Homo sapiens


Alignment Length:735 Identity:171/735 - (23%)
Similarity:285/735 - (38%) Gaps:197/735 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   588 CPYPARPTSTSCTNSFNRRHIRRHKGKLG------DRLLSGDSEESVRCSYCSVLNVNDNDLRIS 646
            |.:...|.:.|...|      |..:..||      |.|.......|.||....|...|::...|.
Human    66 CDFLTGPNTPSSAVS------RLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIM 124

  Fly   647 FENTCTDSLVTAFDDEALLI--CDQ-------------GTEMVHFDDVSLYGTP----------K 686
            |        :..|:|.|.|:  |..             |:|..|       |.|          |
Human   125 F--------ILNFEDLAQLLAKCSSRSLSQRLLSQSFLGSEGSH-------GRPGGPGPGTGRGK 174

  Fly   687 EEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKAL-----VKERIRQKTS----- 741
            ...:..||    :.:.||::..|:.  ..:.:...:::....|.:     |.|::.|..|     
Human   175 YRTISQIP----QFTLNFVEFNLEK--HRSSSTTEIEIIAPHKVVERTQNVTEKVTQVLSLGADV 233

  Fly   742 -----------GHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFF--NDDLSTRW-IAFNC- 791
                       ..|.|...|.|:..||..:|||::...:..|.:.:|.  :.|.|.|. .::.| 
Human   234 LPEYKLQAPRIHRWTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGACSYTCS 298

  Fly   792 -------LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFL 849
                   :.|.:|::|||:||||..:..:  ::|:..|:.||.||.:.||.:|::::||.|  .|
Human   299 PLTVVDLIVDIMFVVDIVINFRTTYVNTN--DEVVSHPRRIAVHYFKGWFLIDMVAAIPFD--LL 359

  Fly   850 IFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSA 914
            ||      :..||....|     :.:|:.|:||.|||:.|  :|.||......|           
Human   360 IF------RTGSDETTTL-----IGLLKTARLLRLVRVAR--KLDRYSEYGAAV----------- 400

  Fly   915 DRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSW 979
                                            :|.|:|...||.||..|:              |
Human   401 --------------------------------LFLLMCTFALIAHWLACI--------------W 419

  Fly   980 VSINELQESY------WL-----------------------EQYSWALFKAMSHMLCIGYGRFPP 1015
            .:|..::..|      ||                       ::|..||:...|.:..:|:|...|
Human   420 YAIGNVERPYLEHKIGWLDSLGVQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSP 484

  Fly  1016 QSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRI 1080
            .:.::...::..|:.|:..||...|:.:.:||.|.|...:|..::.:|:|::.:.::|..:|||:
Human   485 NTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRL 549

  Fly  1081 TEYFEHRYQ-GKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEV 1144
            .|||:|.:. ....|...:|....|.|:.|:..:..|:|:...|.|:.|....:..:..|.|...
Human   550 EEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFSGAGKGCLRALAVKFKTTH 614

  Fly  1145 FQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVATSLSDGSYFGEICLL--TNARRVASVRAET 1207
            ..|||.::..|.:.:.:|||..|.::| :.:..|...|.....|||...|  ...:..|.|||.|
Human   615 APPGDTLVHLGDVLSTLYFISRGSIEI-LRDDVVVAILGKNDIFGEPVSLHAQPGKSSADVRALT 678

  Fly  1208 YCNLFSLSVDHFNCVLDQYP 1227
            ||:|..:.......|||.||
Human   679 YCDLHKIQRADLLEVLDMYP 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 8/62 (13%)
Ion_trans 771..1054 CDD:278921 74/322 (23%)
Crp 1118..>1241 CDD:223736 34/112 (30%)
CAP_ED 1124..1233 CDD:237999 32/106 (30%)
KCNH6NP_110406.1 PAS_9 29..132 CDD:290162 17/79 (22%)
PAS 41..132 CDD:238075 17/79 (22%)
Ion_trans 296..520 CDD:278921 68/297 (23%)
Ion_trans_2 <463..517 CDD:285168 13/53 (25%)
Selectivity filter. /evidence=ECO:0000250 476..481 1/4 (25%)
Crp 588..>704 CDD:223736 34/112 (30%)
CAP_ED 594..705 CDD:237999 32/106 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 720..790
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 880..946
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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