DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and cnga2a

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001038211.1 Gene:cnga2a / 751786 ZFINID:ZDB-GENE-061005-1 Length:673 Species:Danio rerio


Alignment Length:649 Identity:156/649 - (24%)
Similarity:284/649 - (43%) Gaps:113/649 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   623 DSEESVRCSYCSVLNV-NDNDLRISFENTCTDSLVTAFDDEALL--ICDQGTEMVHFDDVSLYGT 684
            |..|...|::....:: :|....:....|.....:.:|.|...|  :.:....:..:...||   
Zfish    25 DESEPADCTFSRDQSICDDTSSELQRVATLEQQRLNSFRDRGALSRLVNMVVTLREWAHKSL--- 86

  Fly   685 PKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLF----GSRKALVKERIRQKTSGHWV 745
            .:||..|:          :||:.......|...:||::...    |:..|..|     |.|..::
Zfish    87 QEEEERPD----------SFLERFRGPELQIATSRLSISRHDIQDGNTSAKTK-----KKSDVFI 136

  Fly   746 IHPCSSFRFYWDLCMLLLLVANLII----LPVAISFFNDDLSTR----WIAFNCLSDTIFLIDIV 802
            :.|.....:.|     |.::|:.::    ..||.:.|| :|.||    |:..:.|||.|:::|..
Zfish   137 LSPADDLYYRW-----LFVIASAVLYNWCFVVARACFN-ELQTRNFILWLFLDYLSDVIYILDTC 195

  Fly   803 VNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQIL 867
            |..|||.::|....:.::  ||...::....|.|||:|.||.|..:::..              :
Zfish   196 VRLRTGFLEQGLLVKDLI--KLRESYFHTLQFKLDLLSIIPTDLGYIVIG--------------I 244

  Fly   868 HAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSN 932
            |...          |.|.||:|.|||..:..:.|......||                       
Zfish   245 HVPE----------LRLNRLMRFSRLFEFFDRTETRTSYPNL----------------------- 276

  Fly   933 LILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWV--SINELQESYWLEQYS 995
                        .||.||:..:|:|.||:.|:.|.:....||.|:.||  :|::.:.......|.
Zfish   277 ------------FRICNLVLYILVIIHWNACIYFAISKSLGFGSDQWVYPNISDPKFGTLTRGYV 329

  Fly   996 WALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKV 1060
            :.|:.:...:..||....|.|. .:....:...:.|...:|..:|:...:|.:::::|.:::.::
Zfish   330 YCLYWSTLTLTTIGEMPAPVQD-EEYLFVVFDFLVGVLIFATIVGNVGAMISNMNATRAEFQGQI 393

  Fly  1061 KQVEEYMAYRKLPRDMRQRITEYFEHRYQG-KFFDEELILGELSEKLREDV-INYNCRSLVASVP 1123
            ..::.||.:||:.:::..|:.::|::.:.. |..||:.:|..|..|||.:: ||.:..:| ..|.
Zfish   394 DAIKHYMKFRKVSKELEARVIKWFDYLWTNKKTIDEQDVLKNLPNKLRAEIAINVHLETL-KKVR 457

  Fly  1124 FFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVA-TSLSDGSY 1187
            .|.:.::..:.::|.||:.:||.|||.|.::|.||.:||.|:||.:.:|..:|... ..|:.||.
Zfish   458 IFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGCLAVVADDGVTQYAHLTAGSC 522

  Fly  1188 FGEICLLT------NARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNKIG 1245
            ||||.:|.      ..||.|::|:..|.:||.||.......:.:||..:|.:|....:.|.|.|
Zfish   523 FGEISILNIRGSKMGNRRTANIRSIGYSDLFCLSKGDLMEAVMEYPDAKKVLEEKGRQILIKEG 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 9/45 (20%)
Ion_trans 771..1054 CDD:278921 66/288 (23%)
Crp 1118..>1241 CDD:223736 43/129 (33%)
CAP_ED 1124..1233 CDD:237999 40/115 (35%)
cnga2aNP_001038211.1 Ion_trans 162..386 CDD:278921 66/286 (23%)
Ion_trans_2 <331..381 CDD:285168 9/50 (18%)
Radical_SAM 407..>472 CDD:302752 15/65 (23%)
Crp 452..>591 CDD:223736 46/136 (34%)
CAP_ED 458..574 CDD:237999 40/115 (35%)
CLZ 574..643 CDD:293134 4/13 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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