DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and HCN2

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001185.3 Gene:HCN2 / 610 HGNCID:4846 Length:889 Species:Homo sapiens


Alignment Length:644 Identity:341/644 - (52%)
Similarity:437/644 - (67%) Gaps:76/644 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   685 PKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVKERIRQKTSGHWVIHPC 749
            |..||..:        .|:|::.|..:..||..|:.::::|||:||:.:|:.|.|::|.|:|||.
Human   151 PAGEPRGS--------QASFMQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPY 207

  Fly   750 SSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDN 814
            |.||||||..|||.:|.||||:||.|:||.|:.:..||.||.:|||.||:|:|:||||||:.:||
Human   208 SDFRFYWDFTMLLFMVGNLIIIPVGITFFKDETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDN 272

  Fly   815 AEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLA 879
            .| :||||:.|.|.||||||.:|.:||||:||||||      ::...|| ::....|||||:|..
Human   273 TE-IILDPEKIKKKYLRTWFVVDFVSSIPVDYIFLI------VEKGIDS-EVYKTARALRIVRFT 329

  Fly   880 KLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVF 944
            |:|||:||||||||:||:.||||::.:.                              .::||..
Human   330 KILSLLRLLRLSRLIRYIHQWEEIFHMT------------------------------YDLASAV 364

  Fly   945 MRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQESYWLEQYSWALFKAMSHMLCIG 1009
            |||.|||.||||:.||.|||||||||||.||.|.|||||.:....|.|.||:|||||||||||||
Human   365 MRICNLISMMLLLCHWDGCLQFLVPMLQDFPRNCWVSINGMVNHSWSELYSFALFKAMSHMLCIG 429

  Fly  1010 YGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPR 1074
            |||..|:|:||:||||||||.||||||:|:||||.||||||||||||:||.||||:||::.|||.
Human   430 YGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPA 494

  Fly  1075 DMRQRITEYFEHRYQGKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTK 1139
            |.||:|.:|:|||||||.|||:.|||||:..|||:::|:|||.||||:|.|||||.|||:.::||
Human   495 DFRQKIHDYYEHRYQGKMFDEDSILGELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTK 559

  Fly  1140 LKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVATSLSDGSYFGEICLLTNARRVASVR 1204
            ||:|||||||.||:|||||.||||||.|||. |:..|.....||||||||||||||..||.||||
Human   560 LKFEVFQPGDYIIREGTIGKKMYFIQHGVVS-VLTKGNKEMKLSDGSYFGEICLLTRGRRTASVR 623

  Fly  1205 AETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNKIGKNPNIMHQKDEQLSNPESNTITAV 1269
            |:|||.|:|||||:||.||::||:||:..||||.:||::|||..:|:..|.:.            
Human   624 ADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLHKVQH------------ 676

  Fly  1270 VNALAAEADDCKDDDMDLKENLLHGSESS-IAEPVQTIREGLPRPRSGEFRALFEGNTP 1327
                            ||...:.:..|:: |.|.|:..||.:.:...|:...||....|
Human   677 ----------------DLNSGVFNNQENAIIQEIVKYDREMVQQAELGQRVGLFPPPPP 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 16/41 (39%)
Ion_trans 771..1054 CDD:278921 159/282 (56%)
Crp 1118..>1241 CDD:223736 84/122 (69%)
CAP_ED 1124..1233 CDD:237999 75/108 (69%)
HCN2NP_001185.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..159 3/15 (20%)
Involved in subunit assembly. /evidence=ECO:0000250 158..209 19/58 (33%)
Ion_trans_N 167..209 CDD:285597 16/41 (39%)
Ion_trans 229..474 CDD:278921 159/282 (56%)
Crp 538..>673 CDD:223736 90/135 (67%)
CAP_ED 544..652 CDD:237999 75/108 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..889
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 178 1.000 Domainoid score I3565
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4011
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000897
OrthoInspector 1 1.000 - - otm42053
orthoMCL 1 0.900 - - OOG6_101339
Panther 1 1.100 - - O PTHR45689
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8464
SonicParanoid 1 1.000 - - X717
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.790

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