DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and HCN3

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_065948.1 Gene:HCN3 / 57657 HGNCID:19183 Length:774 Species:Homo sapiens


Alignment Length:582 Identity:325/582 - (55%)
Similarity:417/582 - (71%) Gaps:50/582 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   685 PKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVKERIRQKTSGHWVIHPC 749
            ||..|.|.             :..|.:..|||.|:.::::|||.||:..|:.|.|::|.|:|||.
Human    38 PKSGPEPK-------------RRHLGTLLQPTVNKFSLRVFGSHKAVEIEQERVKSAGAWIIHPY 89

  Fly   750 SSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDN 814
            |.|||||||.||||:|.|||:|||.|:||.::.|..||.||.||||.||:|:|:||||||:.::.
Human    90 SDFRFYWDLIMLLLMVGNLIVLPVGITFFKEENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEG 154

  Fly   815 AEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLA 879
            || ::|.|:.|...||||||.:|||||||:|||||    :::|:...|: ::....|||||:|..
Human   155 AE-ILLAPRAIRTRYLRTWFLVDLISSIPVDYIFL----VVELEPRLDA-EVYKTARALRIVRFT 213

  Fly   880 KLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVF 944
            |:|||:||||||||:||:.||||::.:.                              .::||..
Human   214 KILSLLRLLRLSRLIRYIHQWEEIFHMT------------------------------YDLASAV 248

  Fly   945 MRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQESYWLEQYSWALFKAMSHMLCIG 1009
            :||||||.||||:.||.|||||||||||.||.:.|||||.:....|..|||.|||||||||||||
Human   249 VRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINHMVNHSWGRQYSHALFKAMSHMLCIG 313

  Fly  1010 YGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPR 1074
            ||:..|..:.|:||||||||.||||||:|:||||.||||||||||||:||.||||:||::.|||.
Human   314 YGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPA 378

  Fly  1075 DMRQRITEYFEHRYQGKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTK 1139
            |.||||.||:|||||||.||||.|||||||.|||::||:.||.|||.:|.||:||.:||:.|:||
Human   379 DTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFTCRGLVAHMPLFAHADPSFVTAVLTK 443

  Fly  1140 LKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVATSLSDGSYFGEICLLTNARRVASVR 1204
            |::|||||||::::||::|.||||||.|::. |:|.|...|.|:||||||||||||..||.||||
Human   444 LRFEVFQPGDLVVREGSVGRKMYFIQHGLLS-VLARGARDTRLTDGSYFGEICLLTRGRRTASVR 507

  Fly  1205 AETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNKIGKNPNIMHQKDEQLSNPESNTI 1266
            |:|||.|:||||||||.||:::|:||:..||||.:||.:|||..:|:.:|..:.|...|..|
Human   508 ADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVAMDRLLRIGKKNSILQRKRSEPSPGSSGGI 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 18/41 (44%)
Ion_trans 771..1054 CDD:278921 154/282 (55%)
Crp 1118..>1241 CDD:223736 76/122 (62%)
CAP_ED 1124..1233 CDD:237999 68/108 (63%)
HCN3NP_065948.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48 4/22 (18%)
Involved in subunit assembly. /evidence=ECO:0000250 46..91 18/44 (41%)
Ion_trans_N 49..91 CDD:285597 18/41 (44%)
Ion_trans 111..358 CDD:278921 154/282 (55%)
Interaction with KCTD3. /evidence=ECO:0000250|UniProtKB:O88705 354..774 136/217 (63%)
Crp 422..>560 CDD:223736 83/138 (60%)
CAP_ED 428..536 CDD:237999 68/108 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 682..774
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144999
Domainoid 1 1.000 178 1.000 Domainoid score I3565
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000897
OrthoInspector 1 1.000 - - otm42053
orthoMCL 1 0.900 - - OOG6_101339
Panther 1 1.100 - - LDO PTHR45689
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8291
SonicParanoid 1 1.000 - - X717
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.770

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