DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and cnga4

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_002663442.3 Gene:cnga4 / 568123 ZFINID:ZDB-GENE-070912-292 Length:648 Species:Danio rerio


Alignment Length:616 Identity:139/616 - (22%)
Similarity:267/616 - (43%) Gaps:111/616 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   726 GSRKALVKERIR-QKTS-GHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFF--NDDLSTRW 786
            |....|.|::.. .||: ..|||.|...|.:.|...|.|.:..|.:|:.....|:  .:.....|
Zfish    24 GQESTLKKKKDETPKTNWKEWVIDPSEEFYYTWLQIMTLPICYNWVIIICRTCFYTIEEAYVATW 88

  Fly   787 IAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRT----WFFLDLISSIPLDYI 847
            :..:.|.|.::::|.::.||||.::|.   .::.|...:...|||:    |   |:.|.:|.|.:
Zfish    89 LTLDYLCDLVYVLDTIIGFRTGFLEQG---ILVRDLSRLKTRYLRSSRFKW---DMTSLLPTDLL 147

  Fly   848 FLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKK 912
            :|...              :|                ..|:|::|.:                  
Zfish   148 YLQLG--------------IH----------------TPLVRVNRFL------------------ 164

  Fly   913 SADRRGRMNRKDKDGLTKSNLILKFLN---MASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGF 974
               |.||:|    :.|.:......|.|   :|.:.:.||.||       ||:.|:.|.:....||
Zfish   165 ---RTGRLN----EALDRMETRTSFPNAFRVAKLMLYIFVLI-------HWNACIYFSLSNYIGF 215

  Fly   975 PSNSWV--SINELQESYWLEQYSWALFKAMSHMLCIGYGRFP-PQSLTDMWLTMLSMISGATCYA 1036
            .::.||  :|:..:.:....||.:..:  .|.::....|..| |:...:....:..|:.....:|
Zfish   216 GADPWVYPNISHPEFASMRRQYFYCFW--FSTLILTTVGDTPTPEREEEYMFLIADMLIAVLVFA 278

  Fly  1037 LFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY-QGKFFDEELILG 1100
            ..:|...::|.||......:....:.|:.|:...::.:::::|:.::::|.: ..|...|..||.
Zfish   279 SVVGSMGDVISSLRDRDNVFFPDHELVKGYLRSHRISKELQKRVNDWYQHLHINKKITRENEILQ 343

  Fly  1101 ELSEKLR-EDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFI 1164
            .|...|: ...::.:..:| :.|..|.|.:::.:..:|.||..:|:.||:.:.|:|.:|.:||.|
Zfish   344 HLPMTLQTATAVSVHLPTL-SKVTIFQNCENSLLEQLVLKLTPQVYSPGEYVCKKGDVGHEMYII 407

  Fly  1165 QEGVVDIVMANGEVATS-LSDGSYFGEICLL------TNARRVASVRAETYCNLFSLSVDHFNCV 1222
            :||.:.:|..:|....: |.||::||||.:|      :..||.|::|:..|.:|||||.:.....
Zfish   408 KEGKLAVVADDGVTQFAVLGDGNFFGEISILNIKGNKSGNRRTANIRSIGYSDLFSLSKEDLTET 472

  Fly  1223 LDQYPLMRKTMETVAAERLNKIGKNPNIMHQKDE-QLSNPESNTITAVVN-------ALAAEADD 1279
            |.:||..::.:|....:.|.|:|.....:..:.| :.:..:.|.:..::.       .|.||.:.
Zfish   473 LLEYPAAKRLLEEKGRQILTKMGMLEEAVEGEGEVEKTEDKVNRLEGILEMLQTKLARLIAELES 537

  Fly  1280 C------KDDDMDLKENLLHGSESSIAEPVQ 1304
            .      :.|.::|:   ..|.|..:||..|
Zfish   538 SARKMMQRVDQLELQ---TEGWEGIVAEGAQ 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 9/26 (35%)
Ion_trans 771..1054 CDD:278921 57/294 (19%)
Crp 1118..>1241 CDD:223736 42/129 (33%)
CAP_ED 1124..1233 CDD:237999 39/115 (34%)
cnga4XP_002663442.3 Ion_trans 77..294 CDD:278921 57/286 (20%)
Crp 361..>497 CDD:223736 45/136 (33%)
CAP_ED 367..483 CDD:237999 39/115 (34%)
CLZ 483..552 CDD:293134 10/68 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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