DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and cnga3a

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_005166141.1 Gene:cnga3a / 567242 ZFINID:ZDB-GENE-090611-2 Length:765 Species:Danio rerio


Alignment Length:603 Identity:154/603 - (25%)
Similarity:280/603 - (46%) Gaps:127/603 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   744 WVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLST---RWIAFNCLSDTIFLIDIVVNF 805
            |::.|.|...:.|...:...:..||::| |..:.||:..:|   .||..:..||.|:.:|..|..
Zfish   232 WIMDPASDKYYRWLSIIAAPVFYNLMML-VTRACFNELQNTYTILWIVLDYTSDVIYYMDTFVRS 295

  Fly   806 RTGIMQQDNAEQVILDPKLIAKHYLRT--WFFLDLISSIPLDYIFLI---FNQIMKLQDFSDSFQ 865
            |||.::|.   .::.|.|.:..:| ||  .|..|:||.||.| :|::   ||.            
Zfish   296 RTGFLEQG---LLVKDSKKLINNY-RTIPQFKYDMISMIPTD-LFMLKVGFNN------------ 343

  Fly   866 ILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTK 930
                          ..|...||.:::||..:..:.|                           |:
Zfish   344 --------------PELRFNRLFKMARLFEFFDRTE---------------------------TR 367

  Fly   931 SNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQESY--WLEQ 993
            :       |..::| ||.||:..:|:|.||:.|:.|.:....||.:::||..|.....|  ...:
Zfish   368 T-------NYPNIF-RISNLVLYILVIIHWNACIFFAISKTIGFGTDTWVYPNISHPEYGRLARK 424

  Fly   994 YSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYRE 1058
            |.:.|:.:...:..||....|.:.:..:::.| ..:.|...:|..:|:...:|.::::||.:::.
Zfish   425 YIYCLYWSTLTLTTIGETPPPVRDIEYLFVVM-DFLIGVLIFATIVGNVGAMISNMNASRAEFQA 488

  Fly  1059 KVKQVEEYMAYRKLPRDMRQRITEYFEHRY-QGKFFDEELILGELSEKLREDV-INYNCRSLVAS 1121
            |:..:::||.:||:.:|:..|:.::|::.: :.|..||:.:|..|.:||:.:: ||.:..:| ..
Zfish   489 KIDSIKQYMQFRKVSKDLEARVIKWFDYLWTEKKTCDEKEVLKNLPDKLKAEIAINVHLDTL-KK 552

  Fly  1122 VPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVA-TSLSDG 1185
            |..|.:.::..:.::|.||:.:||.|||.|.|:|.||.:||.|:||.:.:|..:|... ..||||
Zfish   553 VRIFQDCEAGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDG 617

  Fly  1186 SYFGEICLL------TNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTM----------- 1233
            :|||||.:|      ...||.|::|:..|.:||:||.|.....|.:||..:|.:           
Zfish   618 AYFGEISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLVEALTEYPDAKKALEEKGKAILRKD 682

  Fly  1234 ----ETVAA---------ERLNKIGKNPNIMHQK---------------DEQLSNPESNTITAVV 1270
                |.|||         |:::::..|.:||..|               .::::|.|:...|...
Zfish   683 NLLDEAVAAAGADPKDLEEKIHRLEGNLDIMTGKFAKLMAEYTSYQGKIKQRITNMENKVKTLRP 747

  Fly  1271 NALAAEADDCKDDDMDLK 1288
            ..|:...:|.|:::...|
Zfish   748 EDLSEVIEDKKEEEKKTK 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 2/6 (33%)
Ion_trans 771..1054 CDD:278921 67/292 (23%)
Crp 1118..>1241 CDD:223736 52/153 (34%)
CAP_ED 1124..1233 CDD:237999 45/115 (39%)
cnga3aXP_005166141.1 Ion_trans 272..483 CDD:278921 61/277 (22%)
Crp 549..>671 CDD:223736 47/122 (39%)
CAP_ED 555..671 CDD:237999 45/115 (39%)
CLZ 671..741 CDD:293134 11/69 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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