DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and kcnh2a

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_021336554.1 Gene:kcnh2a / 563802 ZFINID:ZDB-GENE-070912-699 Length:1254 Species:Danio rerio


Alignment Length:845 Identity:200/845 - (23%)
Similarity:331/845 - (39%) Gaps:229/845 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 ASPKSSVSSNGHLNKYCLTDLTRRKAEFNRQLSAPTDYTHHSSSNGSQQEGSSEANE-------- 531
            :||...::     ||..:..|::.:   .|:|..|....|  |.:||:|....:..:        
Zfish   141 SSPGRDIN-----NKNPIPWLSKAR---RRRLRLPLPLLH--SLSGSKQSLHEDTEKGFMQPMPH 195

  Fly   532 -GHEPVG---------------------------ESTITVASAGVSYPHP--YSYPYHYAHHASS 566
             |||.|.                           ||...:..:.||.|.|  :|......|:.:|
Zfish   196 MGHESVALDKLLSLPERSALGGSQLLFWEDKAQTESESELRPSEVSPPLPQGFSQSSPRLHNLTS 260

  Fly   567 ATAPANLKASLQLHSFGSHHPCPYPARPTSTSCTNSFNRRHIRRHKGKLGDRLLSGDSEESVRCS 631
            ..:|::...:   ||......|.....|:    ||.||           .||.|      .||.|
Zfish   261 EASPSSCSMA---HSRSCESLCGMRPSPS----TNDFN-----------WDRKL------PVRPS 301

  Fly   632 YCSVLNVNDNDLRISFENTCTDSLVTAFDDEALLICDQGTEMVH----FDDVSLYGTPKEEPMPN 692
            ....::     .:.|.:|..:||     |...|....:||::.|    ....:|...|..|    
Zfish   302 STGAMH-----RKASLQNATSDS-----DLIRLRSSGRGTQISHNLIDMKPDALIAVPTGE---- 352

  Fly   693 IPI------------VSEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVKERIRQKTSGHWV 745
            |.|            |:|||      :|:.|        |...:....| |...||.:     |.
Zfish   353 IDIIAPCKLIDRTHNVTEKV------TQVLS--------LGADVLPEYK-LQAPRIHK-----WT 397

  Fly   746 IHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI---AFNC--------LSDTIFLI 799
            |...|.|:..||..:|||::...|..|.:.:|...|.....|   .::|        :.|.:|::
Zfish   398 ILHYSPFKAVWDWVILLLVIYTAIFTPYSAAFLLSDEEEEVIQRCGYSCSTLNVVDLIVDIMFVV 462

  Fly   800 DIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSF 864
            |||:||||..:..:  ::|:..|..||.||.:.||.:|::::||.|.:      |.:.::.:.:.
Zfish   463 DIVINFRTTYVNSN--DEVVSQPGRIAVHYFKGWFLIDMVAAIPFDLL------IYRSEEETTTS 519

  Fly   865 QILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLT 929
            ..|     :.:|:.|:||.|||:.|  :|.||......|                          
Zfish   520 TTL-----IGLLKTARLLRLVRVAR--KLDRYSEYGAAV-------------------------- 551

  Fly   930 KSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQ-----------------GFPSN 977
                             :|.|:|...||.||..|:.:.:..::                 |.|.|
Zfish   552 -----------------LFLLMCTFALIAHWLACIWYAIGNVERSGPSRIGWLNSLGDQLGKPYN 599

  Fly   978 SWV-----SINELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYAL 1037
            |.|     ||.        ::|..||:...|.:..:|:|...|.:.::...::..|:.||..||.
Zfish   600 SSVRGSGPSIK--------DKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGALMYAS 656

  Fly  1038 FLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQ-GKFFDEELILGE 1101
            ..|:.:.:||.|.|...:|..::.:|.|::.:.::|..:|||:.|||:|.:. ....|...:|..
Zfish   657 IFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKG 721

  Fly  1102 LSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQE 1166
            ..|.|:.|:..:..|:|:.|...|..:....:..:..|.|.....|||.::..|.:.:.:|||..
Zfish   722 FPECLQADICLHLNRTLLQSCKAFKGSSKGCLRALAMKFKTTHAPPGDTLVHAGDVISALYFISR 786

  Fly  1167 GVVDIVMANGEVATS-LSDGSYFGEICLLTNAR---RVASVRAETYCNLFSLSVDHFNCVLDQYP 1227
            |.::|:  .|:|..: |.....||| .:.:.||   ..|.|||.|||:|..:..|....||:.||
Zfish   787 GSIEIL--KGDVVVAILGKNDIFGE-PINSYARPGKSSADVRALTYCDLHKIHRDDVLEVLEMYP 848

  Fly  1228  1227
            Zfish   849  848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 8/41 (20%)
Ion_trans 771..1054 CDD:278921 72/315 (23%)
Crp 1118..>1241 CDD:223736 35/114 (31%)
CAP_ED 1124..1233 CDD:237999 33/108 (31%)
kcnh2aXP_021336554.1 PAS_9 29..130 CDD:315989
Ion_trans 407..670 CDD:306908 77/328 (23%)
CAP_ED 744..855 CDD:237999 33/108 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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