DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and cngb3.2

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_009295831.2 Gene:cngb3.2 / 562466 ZFINID:ZDB-GENE-091118-102 Length:801 Species:Danio rerio


Alignment Length:614 Identity:130/614 - (21%)
Similarity:242/614 - (39%) Gaps:156/614 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   683 GTP---KEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKL--FGSRKALVKERIRQKTSG 742
            |.|   |::.......:..||:...:...|:.:....|||:...:  |..|:.:.          
Zfish   263 GKPVEKKDDKTDEKKSIFSKVNFTCVDFVLKPFEMRMDNRIGKSIDPFTDRRYIT---------- 317

  Fly   743 HWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISF--FNDDLSTRWIAFNCLSDTIFLIDIVVNF 805
             |:.....:|.:            ||..:||.::|  .:.::...|...:.::|.|::.|::  |
Zfish   318 -WLSMVTIAFNY------------NLWFVPVRMAFPYHSPEVVPLWFTLDIIADFIYIFDMI--F 367

  Fly   806 RTGIMQQDNAEQVILDPKLIAKHYLRTWFFL-DLISSIPLDYIFLIF--------NQIMKLQ--- 858
            ....:|......:|.|.::|.|.|..:..|. |:|:.:|:|.:::.|        |::||::   
Zfish   368 FQPRLQFSKGGDIIYDREVIKKKYRESGRFQNDVIAVLPIDLLYIPFGFNSVFRLNRLMKVESFF 432

  Fly   859 DFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRK 923
            :|||              ||..||:...:.|:.|.:.|                           
Zfish   433 EFSD--------------RLEGLLTRAYIWRVIRTIGY--------------------------- 456

  Fly   924 DKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQES 988
                                          :|.|.|.:.||.::..:.||..|..||        
Zfish   457 ------------------------------LLFILHLNACLYYVASVSQGIGSTKWV-------- 483

  Fly   989 YWLEQYSWALFKAMSHMLCIGY--------GRFP-PQSLTDMWLTMLSMISGATCYALFLGHATN 1044
                 ||.   |..:::.|..|        ...| |:::......|.:...||...::.|....:
Zfish   484 -----YSG---KGSAYLSCFFYAEKSLLMIAELPFPETMFGQIFQMTNYFVGALFLSIILAQMRD 540

  Fly  1045 LIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQGK-FFDEELILGELSEKLRE 1108
            :|.:..:.:..:|..:.....||....:|:.::.|:..::.:.:..: ..||..:||::...:|.
Zfish   541 VIGAATAGQTYFRASMDACVAYMVTNHIPKMVQSRVRTWYNYTWDSQGMLDESELLGQMPLVMRT 605

  Fly  1109 DV-INYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIV 1172
            .: ::.|..:. ..:..|...|:..:.|::.:||..|:.|||.::|:|.||.:||.|:.|.|.::
Zfish   606 AIAVDINLATF-QKIELFKGCDNQMLVDMLLRLKSIVYLPGDFVVKKGDIGKEMYIIKAGEVQVI 669

  Fly  1173 MA--NGEVATSLSDGSYFGEICLLTNA-----RRVASVRAETYCNLFSLSVDHFNCVLDQYPLMR 1230
            ..  |..|..:|..|..||||.||.::     ||.|:|.|..:.|||.|.....|.:|..||..:
Zfish   670 GGPDNKIVFVTLKAGCVFGEISLLQSSANGGNRRTANVAAHGFANLFVLDKKDLNDILIHYPESQ 734

  Fly  1231 KTMETVAAERLNKI--GKNPNIMHQKDEQ 1257
            |    |.|.:..|:  .|.|....:.||:
Zfish   735 K----VLARKGRKLLKAKGPPPAAKADEE 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 7/43 (16%)
PLN03192 741..>1214 CDD:215625 106/504 (21%)
cngb3.2XP_009295831.2 PLN03192 307..>704 CDD:215625 101/509 (20%)

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